Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00029 ATGAGCAATATAAGCATGGTGGAGGCCAAGTTGCCACCAGGTTTCAGGTTCCATCCCAGAGATGAAGAACTTGTGTGCGATTACTTGATGAAGAAAGTCACTCACTCTGATAATTCCGATTCCACTCTCATGATTGACGTTGACCTTAACAAGTGTGAGCCTTGGGATATTCCAGAAAGGGCACGCGTGGGAGGGAAGGAGTGGTATTTCTACACGCAGAGGGACAGGAAGTACGCGACGGGGATGAGAACAAATAGAGCGACGGCGTCAGGCTACTGGAAGGCCACAGGGAAGGACAGGTGTGTCCTTAGGATGGGCAAAGTGGTTGGCATGAGAAAGACTTTGGTTTTCTATGAGGGAAGAGCCCCCAAAGGCACCAAGACCGACTGGGTCATGCACGAGTTTCGCCTTCATCCCTCTCCTCATTCTTGTAATCTCCCCATCGAAGACTGGGTTCTCTGTAGGGTTTTCTGCAAGAACAGAGATGAACAAGACAATAATGATAATAATGGAAAATATGGCCTGCGAAGCTCCTATGTTGCCGGTTCTTCTTCTCTTCCTGAATTAATGGATTCTTACATAAGTTTTGATCAGGCTTCTGGTGATCATGCAGCTCATGAATATGAGCAAGTGCCCTGCTTCTCCATCCCTCCTCCTCCAAACCCTAACCCTAGCAGCCTCCATCACACCAACTTATTATTGGCTCCCTCTCCAAATGCAGCTCCAGCTCCATTTTCTCATGACTCCTACGTTCTTAAAGCGTTGTTGACACAACTCTCCAACATGGAAACGCAGCAAGGATCGCCCTCGAGCTTTGAAGTTCATCAAGCTTCTCAGGCCTCCTTTTTGTCTCAACCGCCTATTATTCCCACTTATTTATGGAACAATCACTAG 894 0.4754 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHSDNSDSTLMIDVDLNKCEPWDIPERARVGGKEWYFYTQRDRKYATGMRTNRATASGYWKATGKDRCVLRMGKVVGMRKTLVFYEGRAPKGTKTDWVMHEFRLHPSPHSCNLPIEDWVLCRVFCKNRDEQDNNDNNGKYGLRSSYVAGSSSLPELMDSYISFDQASGDHAAHEYEQVPCFSIPPPPNPNPSSLHHTNLLLAPSPNAAPAPFSHDSYVLKALLTQLSNMETQQGSPSSFEVHQASQASFLSQPPIIPTYLWNNH 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00029 297 Pfam No apical meristem (NAM) protein 12 137 IPR003441 GO:0003677|GO:0006355
Accr15g00029 297 Gene3D NAC domain 20 164 IPR036093 GO:0003677|GO:0006355
Accr15g00029 297 ProSiteProfiles NAC domain profile. 11 159 IPR003441 GO:0003677|GO:0006355
Accr15g00029 297 FunFam NAC domain-containing protein 100-like 20 163 - -
Accr15g00029 297 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 238 - -
Accr15g00029 297 SUPERFAMILY NAC domain 2 159 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00029 2 295 NAC Transcription Factor Family AT1G56010 52.454 4.70e-104 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr15g00029 NAM 4.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00029 - - ahf:112703413 331.257