Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00024 ATGGAAGATCGCAATCAATGGCATCTTTACGACCCACTTCTTCTCACAGACGCTTCTTTGCAGCATAAAAGCTCTTCTATTCACTCCATTTACAATTCACAAACGTCACTGAGCTCTCTAAGTCCAACAATGGCGGATACTGAATGGCAGGACAGCCAAAATGACGAATTTTCTTGGAAAAGACGAGAGTTTGACAAAAAATATGTGCAATTCGAAGACCCAATAGCAAAGAAAGTGGTTGACGGCCGATCACTGTTAGGATATTCTTTAAGGTCGCCTGATTTGGTCATCTGCGCTGGCTCACCAGATATTGCCATTGAATCCCCTGAGATGTTGGAAAACAAATCTCGTCAAAAAGTGGAGTCGCCTGTGGAGCTTTCTTTAGAGAATGGAATAAATGGGTCTGATGTTGTAAAGCATCAGAAGATTCCAACTGTCAAATTCTCTATGTTTTGTGAAACCTTCAAAGAGCTGTCTCCCGATGCCTCTTTTGAGCTTTTCCCACCCCCAGAAGTCACCGATAAGTCGCCTCAAGATTACCCTTCTAGAGAAAATGAATTGCAAGAAGATTTTAAAGTATCACAAGAGGCAGAGTTGGATTCTCCAGATGGTAGCGGAGATAACGAGGAAGAAGAGGATTTTCAGAAGCTGAGTAGGGAATTCAAGTGTCAGAAAAAGGAGCTGGCTGAAACTAGGAGGATGTTGGAGGAACTCAAAAGGGAGAATCAACAGAAGAATAGAGAATGCCAAGAAGCATTGAAGTCTTTGCAAGATCTTCAGAATGAGCTCATGCGCAAGTCCATGCATGTAGGATCATTGGCATTTGCGGTTGAGGGGCAAGTAAAAGAAAAAAGCAGGTGGTTTTCCTCTCTGAGAGACTTGATGAGGAAAGTAAAGATTATGAAAATGGAACACATCAAACTATCAGAGGAAATAGAGACGTATAAGAAGTATCTTGCAGATATGAGTGAAATGGGGATTACTATCAAGTCCAAGATACACGAGCAGCTGGAGTTCCAAGAAGATCTCAAGACCAAATATCTAGATGGCGCTGGGAAACAAAAAGAACTTTACAATAAGGTTTTGGAGCTGAAAGGAAACATCAGGGTCTTTTGCCGGTGTAGGCCTCTTAATGCAGAAGAGATGACATCGGGAGCAAGAATGGCAATAGATTTTGAATCAGCGAAAGATGGTGAGCTTACTGTACTGTCAAATGGGGCTTCTAGAAGGACTTTCAAGTTTGATGCTGTTTTTGGGCCCCAAGCAGATCAAGCCGACATATTTGAAGACACGGCACCATTTGCAACCTCAGTTCTAGATGGGTATAATGTATGCATATTTGCTTATGGGCAGACTGGAACAGGAAAAACATTTACAATGGAAGGTACAGAAAAGGCACGTGGAGTTAATTTCAGGACTCTTGAGAAAATGTTTGACATAATCAAAGAGAGACAGAAGCTCTATCGTTATGATGTCTCTGTGAGCGTCTTAGAAGTCTACAATGAGCAAATAAGAGACTTGCTTGTCTCAGGAAATCAGCTAGGAATAGCTGCAAGAAGGCTTGAAATAAGGCAAGCAGGCGAAGGAATGCACCATGTTCCGGGACTTGTGGAGGCACACGTGAATAACATGACTGAAGTCTGGGAAGTCCTACAAACTGGCAGCAACGCAAGGGCTGTTAGCTCAACCAATGCCAATGAGCACAGCAGTCGATCCCACTGCATTCACTGTGTGATGGTGAAGGGGGAGAATTTGTTGAATGGGGAATGCACAAGGAGCAAGTTGTGGCTAGTAGACCTGGCAGGCAGCGAGCGAGTGGCTAAAACAGAAGTGCAAGGGGATCGACTCAAGGAAACTCAGAATATTAATAGGTCTCTCTCTGCACTAGGAGATGTTATATCAGCTCTTGCAACAAAATGCTCGCATGTTCCCTTCAGAAATTCCAAACTCACACACTTGCTGCAAGACTCTTTAGGAGGAGATTCAAAGGCGCTGATGTTTGTACAGATTAGTCCTAATGAACATGATTTAAGCGAGACGATTTGCTCTCTGAACTTTGCTAGTAGAGTGAGAGGAATAGAATTAGGGCCTGCAAAAAGGCAATTGGACCCTACTGAGCTTCTCAAATACAAACAATTGGCCGAGAAAACCAAGCAAGAGATGAAGATTAAGGACTTGCAAATCAAGAAAATGGAGGAAACAATTCAAGGATTAGATTCCAAGATAAAGGAGAGAGATGTTAAAACTAAAACTCTGCAAGATAAGGTCAAGGAATTGGAATCCCAACTTTTGATTGAGAGAAAGCTGGCGCGTCAACATGTAGACTCAAAGATAGCTGAGCAGCATCAGCTTAAACATCAAGAGCAAAACAACACACCAATGAGACCAGCACTTGCAAACAAACCACTAGGAATTCACAAGAACTTGAATGATTTCATGAGTTCAACTAGACCACTAATGGAGAACAATATCTTAAAGCAGCCCTCACTGCCCTTTTCAACGTTGGAAAACTCTATCAAGTGCATTGATCACGCCGAGAAAGAGAACAATCCTGACATAGTTGACAAACTTGTATTGCCTAAAAGGACTGGAAGAGCTTCTATCTGCACATCTACTCCACGTATTCCTTCAGTCACAACTTTAAGGCGAAACTCTCTGATACCTCTACCAACTGTGGCTAACTTACCTCAACTCCCACCGACAGTAATGCCAGTGCTAGAAAGTAGAGCTGAAGAGGAAGAAAGCAATGATGAAGTGGGAAGCTGTTTGGCTACACAGACACATCTTGAGAGTCCTAAACAAAGAATGAGGAGTGAAAGTAAGAAGAGAGGAAGCAACATGCTAAGGCGAAGCTTATATAAAAAGATTCAGAACAAGTCGCCAATTCAACAACATATGAGAAGGGTTGGTGTAAATGTAGGTATGGAGAAAGTAAGAGTTTCTATTGGGAGTCAAGGGAGGATGATGGCAAAGAGGGTGTTGAGGAAAAATGTTAGAAGAAATGGAACAGAAGAAACTCTGCAAAAGAATAGTCAAAAAGAAAAGGAAAGAGGGTGGAATGCAGGTACAGCAGGCAAATCCACTTTTTCAAAGCAAAGTTGA 3102 0.423 MEDRNQWHLYDPLLLTDASLQHKSSSIHSIYNSQTSLSSLSPTMADTEWQDSQNDEFSWKRREFDKKYVQFEDPIAKKVVDGRSLLGYSLRSPDLVICAGSPDIAIESPEMLENKSRQKVESPVELSLENGINGSDVVKHQKIPTVKFSMFCETFKELSPDASFELFPPPEVTDKSPQDYPSRENELQEDFKVSQEAELDSPDGSGDNEEEEDFQKLSREFKCQKKELAETRRMLEELKRENQQKNRECQEALKSLQDLQNELMRKSMHVGSLAFAVEGQVKEKSRWFSSLRDLMRKVKIMKMEHIKLSEEIETYKKYLADMSEMGITIKSKIHEQLEFQEDLKTKYLDGAGKQKELYNKVLELKGNIRVFCRCRPLNAEEMTSGARMAIDFESAKDGELTVLSNGASRRTFKFDAVFGPQADQADIFEDTAPFATSVLDGYNVCIFAYGQTGTGKTFTMEGTEKARGVNFRTLEKMFDIIKERQKLYRYDVSVSVLEVYNEQIRDLLVSGNQLGIAARRLEIRQAGEGMHHVPGLVEAHVNNMTEVWEVLQTGSNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGECTRSKLWLVDLAGSERVAKTEVQGDRLKETQNINRSLSALGDVISALATKCSHVPFRNSKLTHLLQDSLGGDSKALMFVQISPNEHDLSETICSLNFASRVRGIELGPAKRQLDPTELLKYKQLAEKTKQEMKIKDLQIKKMEETIQGLDSKIKERDVKTKTLQDKVKELESQLLIERKLARQHVDSKIAEQHQLKHQEQNNTPMRPALANKPLGIHKNLNDFMSSTRPLMENNILKQPSLPFSTLENSIKCIDHAEKENNPDIVDKLVLPKRTGRASICTSTPRIPSVTTLRRNSLIPLPTVANLPQLPPTVMPVLESRAEEEESNDEVGSCLATQTHLESPKQRMRSESKKRGSNMLRRSLYKKIQNKSPIQQHMRRVGVNVGMEKVRVSIGSQGRMMAKRVLRKNVRRNGTEETLQKNSQKEKERGWNAGTAGKSTFSKQS 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00024 1033 Pfam Kinesin motor domain 373 693 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr15g00024 1033 CDD KISc_C_terminal 365 695 - -
Accr15g00024 1033 ProSitePatterns Kinesin motor domain signature. 593 604 IPR019821 GO:0003777|GO:0005524|GO:0007018
Accr15g00024 1033 MobiDBLite consensus disorder prediction 997 1020 - -
Accr15g00024 1033 ProSiteProfiles Kinesin motor domain profile. 367 693 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr15g00024 1033 Coils Coil 214 266 - -
Accr15g00024 1033 Gene3D Kinesin motor domain 362 737 IPR036961 -
Accr15g00024 1033 FunFam kinesin-like protein KIN-14R 312 695 - -
Accr15g00024 1033 MobiDBLite consensus disorder prediction 165 215 - -
Accr15g00024 1033 Coils Coil 291 311 - -
Accr15g00024 1033 MobiDBLite consensus disorder prediction 997 1033 - -
Accr15g00024 1033 MobiDBLite consensus disorder prediction 908 948 - -
Accr15g00024 1033 SMART kinesin_4 365 701 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr15g00024 1033 MobiDBLite consensus disorder prediction 932 946 - -
Accr15g00024 1033 PRINTS Kinesin heavy chain signature 643 664 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr15g00024 1033 PRINTS Kinesin heavy chain signature 441 462 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr15g00024 1033 PRINTS Kinesin heavy chain signature 563 580 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr15g00024 1033 PRINTS Kinesin heavy chain signature 594 612 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr15g00024 1033 PANTHER KINESIN-LIKE PROTEIN KLP-3 144 843 IPR027640 GO:0003777|GO:0007018
Accr15g00024 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 367 731 IPR027417 -
Accr15g00024 1033 MobiDBLite consensus disorder prediction 177 197 - -
Accr15g00024 1033 Coils Coil 714 734 - -
Accr15g00024 1033 Coils Coil 742 762 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00024 354 720 Calmodulin-binding Proteins AT5G65930 43.396 1.71e-80 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00024 K10406 - gmx:100817247 1424.84