Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00023 ATGGGTTTTGAGAGGAATTTGCTCATCCAAAAAGGGTTTTACTTGATGATGTTGTTTTGTTTTGGTGTTGTCCAAGTAAGTTCGATTAATGAGGATGGTTCGATTCTTTTGGAGTTTAAAAAATTCCTTTCTGACCCGCAAAACAGTCTTCATGATTGGAATTCTTCTGATTTGACTCCTTGCAATTGGACTGGTGTGCATTGCAATAATTCAGTGGTGACTTCTATAAATCTTAGTCTCCTTACTCTATCTGGCTTTTTATCTCCCATCATCTGCAACCTTCCTCATCTGGTTGAGTTGAATTTGTCAATGAATTTCATTTCTGGCCCTATTCCTGTTGGTTTCGTTGCTTGTAGGAGTCTGGAAATATTAGACCTTTGTACAAACAAATTTCATGGACAACTTGAGAACCCTTTGTGCCAAATTACCTCACTAAGAAAGCTTTATCTGTGTGAAAATTTTATGCACGGTGAAATGCCAGAAGAGATTGGGAATTTGAATTCCCTTGAAGAGCTAGTCATTTATGGCAATAATTTAACTGGAAGAATTCCTACTTCAATAAGTCAATTGAAGCAACTAAGAACTATCAAGGCAGGCTTCAATAGTCTATCAGGCCCAATACCTGGAGAAATTAGTGAGTGTGAGAGCTTGCAGCTGTTAGGATTGGCACAGAATCAGCTTGAAGGTTCAATACCAAGGGAGATTCAGAAGCTTCAGAACCTTACCACTATACATTTGTACCAAAACTTTCTATCTGGGGAGATTCCCCCAGAAATTGGAAATATCAGTAGGTTGGAATTACTTGCTTTGCACCAAAATTTGTTCAGTGGAGCTATTCCAAAGGAGCTGGGAAAGTTATCTCACTTACAACGGTTGTATCTATATACCAACCGCTTGAACGGGACAATTCCTCCGGAGCTAGGGAACCTTACAAGTACTTTGGAGATTGATCTTTCTGAGAACCTTTTGAGTGGTATGATTCCTAAAGAGTTGGGGCAGATCTCTAATCTTGGATTGCTTCATCTATTCGAAAACCTTCTGCAGGGAGAAATCCCTTGGGAACTTGGGCAGTTATGGCTACTCAATACTTTAGATTTGTCCATAAATAACTTAACAGGTAGTATTCCATTAGTGTTTCAAAATCTTACATGCATGGTGGATTTGCAGCTGTTTGACAATCAACTTGAGGGTAAGATACCTCCTGATCTTGGAGCTAGAAGCAACCTCAGTGTTCTTGATTTATCTGCTAACAATCTCGTCGGTATGATACCTGCCCATCTTTGCAAATATCAGAAACTGAAATTTCTAAGCCTTGGGTCAAATAAGTTGTCTGGAAATATTCCGTATGATCTGAAAACTTGCAAGTCACTTGTGCAGCTAATGCTGGGAAACAACCAGCTGACAGGAGGCCTCCCCGTTGAATTGAATGAACTTCATAATCTTTCTGCACTTGAACTTAATCAAAATCGGTTCACTGGGATAATAAACCGAGGTATAGGTCAACTCCAGAGTTTGATGAGGCTTCTGTTGTCAGATAATCATTTTTTGGGGCATCTACCTCCTGAGATTGGAAAATTAGCACAGCTTGTCTCATTTAATGTTTCCTCTAATCTTCTTAGTGGAAGCATCCCTGACCAGTTGGGAAACTGTGTAAAACTACAGAGGCTTGATCTTAGCAGGAATAAGTTCACTGGCACCCTTCCAGGTGAAATTGGCAAGCTGGTGAATTTGGAATTGCTGAAACTTTCTGATAATAAATTTTCAGGAGCAATACCAAGCGCTTTAGGGGATCTTACTCGTCTCACAGAGCTGGAGCTTGGTGGTAACTTGTTTTCAGGTAGCATTCCTCTTCATTTGGGAGGACTTACAGCTCTTCAGATTGCCCTTAATATGAGCCATAACAAACTATCTGGTGTAATTCCTGACAGCTTGCGGAACTTACAGATGTTGGAATTCCTTTACTTAAATGACAATGAGCTTGTTGGTGAAATTCCCGCCTCAATAGGTAACTTGCCCAGCCTTTTGGTTTGCAATGTTTCTAACAACAACTTGACTGGAACTATTCCAAACACTCCTGCATTTCAAAAGATGGATTTCACAAATTTTGCTGGAAACAATGGACTGTGCCAAGTAGGTTCCTATTATTGCCATCCATCCAAGTCTCCCCCCTCTCCTCCAAACCAAAGTTGGACTAGAGATGGTTCTTTCAGGGAGATGATAGTGAGTATAGTTTCGGGTGTGGTTGGATTGATTTCTCTTACGTTCATAATCTGTATTTGTTGGGCTATGAAGCGCAAAAGCCCTTCTTTTGTCTCCTTAGAAAGGCAAGCAATGCCTCATGCCCTAAACAACTATTATTTTCCGAAAGAAGGTTTCACATACCAGGATCTCTTGGAAGCCACTGGTAATTTTTCAGAAGCTGCAGTTATAGGAAATGGAGCATGCGGCACTGTCTACAAGGCTACTATGGCTGACGGTGAGGTGATTGCGGTCAAAAAGCTGAATTCTTCTGGAGAAAGAGCAAATGTTGACAGAAGCTTTCTTGCAGAGATTTCAACCCTAGGGAAGATCAGACACAAGAATATTGTGAAATTGTATGGATTTTGTTTTCATGAGGATTCAAAGATTCTCTTATATGAGTACATGGAAAACGGCAGCCTTGGAGAACAACTCCATGCAAATCCAGAGTCATGTCCACTGGATTGGAATAGTCGGTATAAGATTGCTCTTGGGGCTGCACAAGGCTTGTGCTACCTTCATTATGACTGCAAACCTCAAATCATTCACCGCGATATTAAGTCAAACAACATACTACTTGATGAAAATTTTCAGGCACGCGTTGGAGACTTTGGCCTTGCAAAGCTGATTGACTTTTCATATTCCAAATCCATGACTACCGTGGCGGGTTCATTTGGCTACATTGCTCCTGAATATGCTTACACCATGAAGGTGACTGAGAAATGTGACATCTATAGCCTTGGGGTGGTTTTGTTGGAACTAGTCACCGGCCGTTCACCAGTTCAGCCGCTGGAACAGGGTGGTGATTTGGTAACTTGGGTGAGAAGATCAATTCAAGCATCAGTGCCAACCTTGGAACTATTTGACAAGCGACTGAATCTGAATGAACAAAGAACAGTTGAAGAGATGTCTCTTGTTCTCAAAATTGCATTGTTCTGCACCAGTGCCTCTCCTCTCAATAGGCCAACAATGAAAGAGGTCATTGCAATGTTGATCGATGCTAGAGAGTATGTCAGCAATTCTTCTTCAGCCCCTACATCAGAATCCCCACTTGATACATGA 3300 0.4109 MGFERNLLIQKGFYLMMLFCFGVVQVSSINEDGSILLEFKKFLSDPQNSLHDWNSSDLTPCNWTGVHCNNSVVTSINLSLLTLSGFLSPIICNLPHLVELNLSMNFISGPIPVGFVACRSLEILDLCTNKFHGQLENPLCQITSLRKLYLCENFMHGEMPEEIGNLNSLEELVIYGNNLTGRIPTSISQLKQLRTIKAGFNSLSGPIPGEISECESLQLLGLAQNQLEGSIPREIQKLQNLTTIHLYQNFLSGEIPPEIGNISRLELLALHQNLFSGAIPKELGKLSHLQRLYLYTNRLNGTIPPELGNLTSTLEIDLSENLLSGMIPKELGQISNLGLLHLFENLLQGEIPWELGQLWLLNTLDLSINNLTGSIPLVFQNLTCMVDLQLFDNQLEGKIPPDLGARSNLSVLDLSANNLVGMIPAHLCKYQKLKFLSLGSNKLSGNIPYDLKTCKSLVQLMLGNNQLTGGLPVELNELHNLSALELNQNRFTGIINRGIGQLQSLMRLLLSDNHFLGHLPPEIGKLAQLVSFNVSSNLLSGSIPDQLGNCVKLQRLDLSRNKFTGTLPGEIGKLVNLELLKLSDNKFSGAIPSALGDLTRLTELELGGNLFSGSIPLHLGGLTALQIALNMSHNKLSGVIPDSLRNLQMLEFLYLNDNELVGEIPASIGNLPSLLVCNVSNNNLTGTIPNTPAFQKMDFTNFAGNNGLCQVGSYYCHPSKSPPSPPNQSWTRDGSFREMIVSIVSGVVGLISLTFIICICWAMKRKSPSFVSLERQAMPHALNNYYFPKEGFTYQDLLEATGNFSEAAVIGNGACGTVYKATMADGEVIAVKKLNSSGERANVDRSFLAEISTLGKIRHKNIVKLYGFCFHEDSKILLYEYMENGSLGEQLHANPESCPLDWNSRYKIALGAAQGLCYLHYDCKPQIIHRDIKSNNILLDENFQARVGDFGLAKLIDFSYSKSMTTVAGSFGYIAPEYAYTMKVTEKCDIYSLGVVLLELVTGRSPVQPLEQGGDLVTWVRRSIQASVPTLELFDKRLNLNEQRTVEEMSLVLKIALFCTSASPLNRPTMKEVIAMLIDAREYVSNSSSAPTSESPLDT 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00023 1099 SUPERFAMILY L domain-like 30 300 - -
Accr15g00023 1099 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 406 720 - -
Accr15g00023 1099 Gene3D Phosphorylase Kinase; domain 1 769 881 - -
Accr15g00023 1099 SMART serkin_6 804 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr15g00023 1099 Gene3D Ribonuclease Inhibitor 28 178 IPR032675 -
Accr15g00023 1099 SUPERFAMILY RNI-like 364 690 - -
Accr15g00023 1099 SMART LRR_typ_2 238 262 IPR003591 -
Accr15g00023 1099 SMART LRR_typ_2 478 501 IPR003591 -
Accr15g00023 1099 SMART LRR_typ_2 502 526 IPR003591 -
Accr15g00023 1099 SMART LRR_typ_2 647 671 IPR003591 -
Accr15g00023 1099 SMART LRR_typ_2 286 310 IPR003591 -
Accr15g00023 1099 SMART LRR_typ_2 94 118 IPR003591 -
Accr15g00023 1099 SMART LRR_typ_2 166 190 IPR003591 -
Accr15g00023 1099 SMART LRR_typ_2 622 646 IPR003591 -
Accr15g00023 1099 SMART LRR_typ_2 574 598 IPR003591 -
Accr15g00023 1099 ProSitePatterns Serine/Threonine protein kinases active-site signature. 927 939 IPR008271 GO:0004672|GO:0006468
Accr15g00023 1099 Gene3D Ribonuclease Inhibitor 382 722 IPR032675 -
Accr15g00023 1099 PANTHER RECEPTOR-LIKE PROTEIN 55 469 1078 - -
Accr15g00023 1099 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 28 184 - -
Accr15g00023 1099 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 882 1094 - -
Accr15g00023 1099 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Accr15g00023 1099 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 281 375 - -
Accr15g00023 1099 SUPERFAMILY Protein kinase-like (PK-like) 785 1077 IPR011009 -
Accr15g00023 1099 Gene3D Ribonuclease Inhibitor 279 381 IPR032675 -
Accr15g00023 1099 Gene3D Ribonuclease Inhibitor 179 278 IPR032675 -
Accr15g00023 1099 FunFam Predicted protein 185 280 - -
Accr15g00023 1099 Pfam Leucine rich repeat 504 563 IPR001611 GO:0005515
Accr15g00023 1099 ProSiteProfiles Protein kinase domain profile. 804 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr15g00023 1099 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 769 881 - -
Accr15g00023 1099 Pfam Protein kinase domain 806 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr15g00023 1099 Gene3D Transferase(Phosphotransferase) domain 1 882 1094 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00023 23 1089 Receptor kinase-like Gene Family AT1G73080 38.241 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr15g00023 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00023 - - qsa:O6P43_001162 1628.99