Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00017 ATGAGACGTGAATCAGGGACTTGTAATGTGTGTTCAGCTCCTTGTTCATCTTGTATGCATTTTAACCGTGCTTGCATGGGATCAAAGGTTGAGTTCTCCGATGAAAATTGCCGTTTAGCGGGGAGTAATCATTATTCTATGGATGAAGGTGATATATCTTCTCTCAGGAGCAGGGTTCATGAAAGTATTCAGCATGCTGACATGCACAGTGTCGATTCCAGCCATGATTCTCTATCTGAAAATGTGGATAGTAAACAGACTTTGTCAAGTAAGTGTCAGGAGTCTAAGTACCTAGAAGGTCTTGATGATAACACTTCTTGTATTAGTAGAGCGAGTGATGCTAATTTAGCAAACAGTAGTCATCCCAAGATTGTAGACAAAAGAAATGTATCTTGTAGTTTGGCTTCGGTTAATATTTTAGGGGCAGAAGGATCTGTAAGTGCACAATCTTTTGACATGTCTGGCTTACCTGAGACTCCTCCTTCCAAAGATGTGGATACCGATGAGAGCTCACCTAAGGTACACAGCCAAGATGCAAAGTCTCAGAGTGTTAAGTCGCATTCGACCATTCCAAGGTTAATGGATGTGGAAAGAGATGAAGATTCTCTTATTCCAGAAAAACCTGAATGCTCCACTGAAAACGCTGATCCATCATTGAGAAAAGTGATAGCAACTTCGGTTGTTTCTGGTGAGAACCCTATTGCTGTTAAGGATAATCTTATTGATGGTAGCAACACGGCTTCACGTAAAATATATTCCAAGTCAGAAGTTGATGCTGTCAATGAAGTTGGGGTTGCCCCAGATGAATCTCATAATGCTGCAGTCCAAGATGAGCGGGATAAAGCTGAGCAACCCCTCAGATCAACTGGCAAGGAGGAGCCTCAGTCTGAAGATCAGAGTGACGAATCAGATGTTGTTGAGCATGATGTAAAAGTTTGTGATATCTGTGGAGATGCTGGTCGGGAAGATCAACTCGCCATATGTAGTAGGTGCAGTGATGGCGCGGAACACACTTATTGCATGAGAGAAATGCTTCAGAAGGTCCCTGAAGGAGATTGGCTATGTGAAGAATGCAAAGAGACAGAAAATCAGAGGCTAGATGTTGAAGAAAGAAAAATTCCAAAATTTAGTTCAACACCACAACATTCTGGCAAGAGGCTGTCTGAGAATATAGAACTGGCTCCTGCACCAAAAAGGCAGGCTCTTGAGTCAAGCTCGGGCTCACCGAAGTCATCAAGTCCCAAGAGAGCTGTTGCACTTCCTCAAGAATCTTCATGGAAGAGCTTAGATAAAGGTAAAGTGAAGCCTGATAATCAGATGCCTATACGGAATCAGTCTGGCAGTGATAACATGGAAACAGTTTGTTCTCCTTCTGGCCCTCGGAGTCTACTTCGAAAGGGTCTGTTGAAATCTAATTCATTCAACGCATTAAATTCAAAGCCTCGGGTGAAACCCGTTGATGAAGTTATCCCCCAAAAGCTGAAAGGGTCTAGTGAAAATACTTCTAAGAATTTGGAGACACCTGCCCGGATGATAGGCAAATCTATGTCATTCAAATCCATGAATTTGGGTCGTTCAAGTACAACTGCATCAAAAGTAAAACCGCTTTCATCAAAATCTATACCCGCTCAGGATTTGAAAGGAACAAGGCTTGCAAAAGACTCCAGTGCATTTGACAGGAAAAGTCTCTCTAGGGTAGATCGATCAGCGGCTTGCTCAACAATGGCTACCCCTGTTGTTTCAACACCCAAAGGTGATCAGAAGAGCACAACTCTTAGTGAAACTATTAAACCTTCATCAGTTGGCAACAACCGAGACTTGAAGGTGAATCAAGATGGGAAATTAAGTACCTTATCAAAGTCTACTAGTAATGTAGGCCGTAAGGGTGTAGAACCTCAAGTCTGTTCAGGGAGAATATATACCAGCGGTGATGAATCTGTACAAGATTTGCAGCCTCGAGAAACAGCCAATCCTGTTGAGAAAACCAGAGATAGCTCTAGTGATCGTGTGAGGACAGATGCCATTGCTAAGGAGTTTGGTCATGCTACAGGATGTTGCACAATTGGTAAAATCCAAGAATCTTGTACTGAAATTAATGTTGCTACCGCAAGTAGTTCTATAGAGGAGATGCATAAAAGTGATAATGTGAAAGCTGCTCTCCAAGCAGCTTTGCTTAGAATGCCTGAAATGTACAAAAAGAAAGAAGTGGCTAATCAAATGGATGAGCTTGGCACAGACGTGAAATGTGAAGCCACAGCTCAAGACCAAGTACTTGGTTCTGGCACGCCAAAGAATAATATATCTGCTGAAGAAATTCTTGATGGGAAGGACGCAATCGAGAGCTCTGCTGCTGCATCTTTGAAATTTTCATCTGGTGAAAAACAGCTTAACTTAAGCCGAAGTGATTCTTGTTCTCAATTAGGAATCTCAGGTGTGGTTGATCCTTCCATTGGAAAGATTGCTGTGAGAGACTTTCCAAATCAACCTTTGGCAATCTCACGTGTTCTTCCAAAGATGGCTGTTCCTGACTATGAATGCATCTGGAAGGGTATCTTTGAGCTACATAGGAGCGGAAAGCCTCCTGACTTGTGTCCTGGAATTCAAGCGCATTTGTCAACTTGTGCTTCCCCAAAGGTTCTTGAAGTGGTGAATAGATTACCATCCAAAATTTCTGTCAGTGAAGTTTCTCGCTCAAGCACGTGGCCTTCACAGTTTAATCAAGGTGGCGCTAAAGAAAATAATATTGCACTTTACTTCTTTGCCCAAGATATTGAAAGTCATGAGAAACACTATGGGGCTCTATTGGATCACATGATGAGGAATGATTTAGCTCTTAAAGGAATCTTTCATGGTGTTGAACTACTCATATTCCCATCCAATCAGCTTCCTGAAAAATCACAGCGTTGGAATATGTTGTTTTTCTTATGGGGTGTGTTTAGGGGGAGAAGGATAAATCATTCAGACTCTGCAGAAAAGACATGTATTCCTAGCTTGAATATGATGCCGGTTAAGAAGGATTTTTCCACTGCCATTGTGACTCTGTCTGAGATCCACTGCTCACCAAAGCAAATGGATGAAGAGTCAATTGCTGGTGATAGGACATATACGGTTCTCCCATCCACTTCCCTAGACCTGGATCAAGCTACAGTAAGTAAGAATTTTGATGGCAAAGAACCTAATCTGGACCGGATACAGTTGGGCTCACAAGTAAACTTAGAGGAGCAAGATAGTAAAATTGACACCAAACCTACATCATGCAGTCTGGCTAGTGGTGCACAGTTATGTCAAGAATTGAAATCTGCTGGTTCATCTGTGAATGGTAGCCCCCTGGAACATGGACAAGCAAAAGAGTCCACACCTTCTCCTGGAGCAATGGGAACAAATGTTACTAGTAGGATTATAGAAACAAAAGTTGATCCTAATATGTCCGTTAAAGAAGAGAAGTCTTTGCTTTCTGAGATCCCTCCTCTTGGCTCTCAAGAGATATGTTTTGCAAGCACTGCCAGTGAGGACAAATTTTCTGAGAGAATGGCAGGTGATATTAAGCAACAAAGGCATATAAAGCAACAGAAAGATGATCAATATATTGACATTGAGACGGCTTTTCAGGGAGAGCTAACTGCAGAAGGGGTGAAGCTTCAGCAACCAAGTGATAGAAGGTTTCAGCATATTGATCTGATGGACACTGCCATGCAGACTTCTGAAGTTTCATGCAAGAGACATTGGAGCGAGGCTGATGTCAAATTAGAAAATGGAGAAAATTCTAGCAAAAAGCTGAAAACAGATGACTGTGGAGCTTTTGGATGTAGCAGTTCTGGAGGTAGAGATTCTTATAGGACCAATTTTGCATCACATAGAAATGGTCTTGGTACCGGTTCTTCAATCAAGGACGAAGGATGTGGTGATATCTGTGATGAGAAAATCATCCTGGAAGACTTGGGAACAATGGAAAGAACTTTCTTTCCTGTTGATGCGCATAACATAAATGATTCTCATTTGGGTTCAAATAGCTTGCCTCATTTGGGTCCAAATAGGTTGTCGTTGAAAGGGCCTCATGTGTGTGATAATCAATTTCATGATGAGATACCAAATTTAGAACTCGGTTTAGGGGGTGAAATGAAACCACCACACAAGGGAATGCTGCCTTTCTTTGTTGGGGAAATAGAAAAGAAGCATTGTCGGGAAAGGCCTCAAGATTGCTTGGCAGATGAGCATGAGGATGATGGTGTTGCAGCATCTCTCTCTCTCTCGTTATCATTTCCATCATCAAACAAAGAGCGTGTTAAAACCGTTTCAAAAGCAGAGCAGGTTTTGCCTGATGGACGCCATGTGAATACTTCGTTGCTTCTTTATGGGAGATTTGCGGAAAAATGA 4374 0.4209 MRRESGTCNVCSAPCSSCMHFNRACMGSKVEFSDENCRLAGSNHYSMDEGDISSLRSRVHESIQHADMHSVDSSHDSLSENVDSKQTLSSKCQESKYLEGLDDNTSCISRASDANLANSSHPKIVDKRNVSCSLASVNILGAEGSVSAQSFDMSGLPETPPSKDVDTDESSPKVHSQDAKSQSVKSHSTIPRLMDVERDEDSLIPEKPECSTENADPSLRKVIATSVVSGENPIAVKDNLIDGSNTASRKIYSKSEVDAVNEVGVAPDESHNAAVQDERDKAEQPLRSTGKEEPQSEDQSDESDVVEHDVKVCDICGDAGREDQLAICSRCSDGAEHTYCMREMLQKVPEGDWLCEECKETENQRLDVEERKIPKFSSTPQHSGKRLSENIELAPAPKRQALESSSGSPKSSSPKRAVALPQESSWKSLDKGKVKPDNQMPIRNQSGSDNMETVCSPSGPRSLLRKGLLKSNSFNALNSKPRVKPVDEVIPQKLKGSSENTSKNLETPARMIGKSMSFKSMNLGRSSTTASKVKPLSSKSIPAQDLKGTRLAKDSSAFDRKSLSRVDRSAACSTMATPVVSTPKGDQKSTTLSETIKPSSVGNNRDLKVNQDGKLSTLSKSTSNVGRKGVEPQVCSGRIYTSGDESVQDLQPRETANPVEKTRDSSSDRVRTDAIAKEFGHATGCCTIGKIQESCTEINVATASSSIEEMHKSDNVKAALQAALLRMPEMYKKKEVANQMDELGTDVKCEATAQDQVLGSGTPKNNISAEEILDGKDAIESSAAASLKFSSGEKQLNLSRSDSCSQLGISGVVDPSIGKIAVRDFPNQPLAISRVLPKMAVPDYECIWKGIFELHRSGKPPDLCPGIQAHLSTCASPKVLEVVNRLPSKISVSEVSRSSTWPSQFNQGGAKENNIALYFFAQDIESHEKHYGALLDHMMRNDLALKGIFHGVELLIFPSNQLPEKSQRWNMLFFLWGVFRGRRINHSDSAEKTCIPSLNMMPVKKDFSTAIVTLSEIHCSPKQMDEESIAGDRTYTVLPSTSLDLDQATVSKNFDGKEPNLDRIQLGSQVNLEEQDSKIDTKPTSCSLASGAQLCQELKSAGSSVNGSPLEHGQAKESTPSPGAMGTNVTSRIIETKVDPNMSVKEEKSLLSEIPPLGSQEICFASTASEDKFSERMAGDIKQQRHIKQQKDDQYIDIETAFQGELTAEGVKLQQPSDRRFQHIDLMDTAMQTSEVSCKRHWSEADVKLENGENSSKKLKTDDCGAFGCSSSGGRDSYRTNFASHRNGLGTGSSIKDEGCGDICDEKIILEDLGTMERTFFPVDAHNINDSHLGSNSLPHLGPNRLSLKGPHVCDNQFHDEIPNLELGLGGEMKPPHKGMLPFFVGEIEKKHCRERPQDCLADEHEDDGVAASLSLSLSFPSSNKERVKTVSKAEQVLPDGRHVNTSLLLYGRFAEK 1457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00017 1457 SMART PHD_3 312 359 IPR001965 -
Accr15g00017 1457 MobiDBLite consensus disorder prediction 552 566 - -
Accr15g00017 1457 MobiDBLite consensus disorder prediction 1100 1127 - -
Accr15g00017 1457 MobiDBLite consensus disorder prediction 639 655 - -
Accr15g00017 1457 MobiDBLite consensus disorder prediction 521 669 - -
Accr15g00017 1457 MobiDBLite consensus disorder prediction 439 457 - -
Accr15g00017 1457 MobiDBLite consensus disorder prediction 394 461 - -
Accr15g00017 1457 MobiDBLite consensus disorder prediction 265 306 - -
Accr15g00017 1457 MobiDBLite consensus disorder prediction 150 217 - -
Accr15g00017 1457 MobiDBLite consensus disorder prediction 369 388 - -
Accr15g00017 1457 ProSiteProfiles Zinc finger PHD-type profile. 310 361 IPR019787 -
Accr15g00017 1457 MobiDBLite consensus disorder prediction 521 544 - -
Accr15g00017 1457 MobiDBLite consensus disorder prediction 69 89 - -
Accr15g00017 1457 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 254 373 IPR013083 -
Accr15g00017 1457 SUPERFAMILY FYVE/PHD zinc finger 301 362 IPR011011 -
Accr15g00017 1457 MobiDBLite consensus disorder prediction 401 419 - -
Accr15g00017 1457 MobiDBLite consensus disorder prediction 272 296 - -
Accr15g00017 1457 MobiDBLite consensus disorder prediction 567 629 - -
Accr15g00017 1457 MobiDBLite consensus disorder prediction 191 207 - -
Accr15g00017 1457 PANTHER - 310 1010 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00017 309 358 C2H2 Transcription Factor Family AT3G01460 38.000 4.87e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00017 - - gmx:100784908 1381.31