Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00016 ATGGTATCACCTGGATCTGGAAATATAACCGTCAGATATCCTATTACTCAGAACGCTGATATGAGACGTGAATCAGGGACTTGTAATGTGTGTTCAGCTCCTTGTTCATCTTGTATGCATTTTAACCGTGCTTGCATGGGATCAAAGGTTGAGTTCTCCGATGAAAATTGCCGTTTAGCGGGGAGTAATCATTATTCTATGGATGAAGGTGATATATCTTCTCTCAGGAGCAGGGTTCATGAAAGTATTCAGCATGCTGACATGCACAGTGTCGATTCCAGCCATGATTCTCTATCTGAAAATGTGGATAGTAAACAGACTTTGTCAAGTAAGTGTCAGGAGTCTAAGTACCTAGAAGGTCTTGATGATAACACTTCTTGTATTAGTAGAGCGAGTGATGCTAATTTAGCAAACAGTAGTCATCCCAAGATTGTAGACAAAAGAAATGTATCTTGTAGTTTGGCTTCGGTTAATATTTTAGGGGCAGAAGGATCTGTAAGTGCACAATCTTTTGACATGTCTGGCTTACCTGAGACTCCTCCTTCCAAAGATGTGGATACCGATGAGAGCTCACCTAAGGTACACAGCCAAGATGCAAAGTCTCAGAGTGTTAAGTCGCATTCGACCATTCCAAGGTTAATGGATGTGGAAAGAGATGAAGATTCTCTTATTCCAGAAAAACCTGAATGCTCCACTGAAAACGCTGATCCATCATTGAGAAAAGTGATAGCAACTTCGGTTGTTTCTGGTGAGAACCCTATTGCTGTTAAGGATAATCTTATTGATGGTAGCAACACGGCTTCACGTAAAATATATTCCAAGTCAGAAGTTGATGCTGTCAATGAAGTTGGGGTTGCCCCAGATGAATCTCATAATGCTGCAGTCCAAGATGAGCGGGATAAAGCTGAGCAACCCCTCAGATCAACTGGCAAGGAGGAGCCTCAGTCTGAAGATCAGAGTGACGAATCAGATGTTGTTGAGCATGATGTAAAAGTTTGTGATATCTGTGGAGATGCTGGTCGGGAAGATCAACTCGCCATATGTAGTAGGTGCAGTGATGGCGCGGAACACACTTATTGCATGAGAGAAATGCTTCAGAAGGTCCCTGAAGGAGATTGGCTATGTGAAGAATGCAAAGAGACAGAAAATCAGAGGCTAGATGTTGAAGAAAGAAAAATTCCAAAATTTAGTTCAACACCACAACATTCTGGCAAGAGGCTGTCTGAGAATATAGAACTGGCTCCTGCACCAAAAAGGCAGGCTCTTGAGTCAAGCTCGGGCTCACCGAAGTCATCAAGTCCCAAGAGAGCTGTTGCACTTCCTCAAGAATCTTCATGGAAGAGCTTAGATAAAGGTAAAGTGAAGCCTGATAATCAGATGCCTATACGGAATCAGTCTGGCAGTGATAACATGGAAACAGTTTGTTCTCCTTCTGGCCCTCGGAGTCTACTTCGAAAGGGTCTGTTGAAATCTAATTCATTCAACGCATTAAATTCAAAGCCTCGGGTGAAACCCGTTGATGAAGTTATCCCCCAAAAGCTGAAAGGGTCTAGTGAAAATACTTCTAAGAATTTGGAGACACCTGCCCGGATGATAGGCAAATCTATGTCATTCAAATCCATGAATTTGGGTCGTTCAAGTACAACTGCATCAAAAGTAAAACCGCTTTCATCAAAATCTATACCCGCTCAGGATTTGAAAGGAACAAGGCTTGCAAAAGACTCCAGTGCATTTGACAGGAAAAGTCTCTCTAGGGTAGATCGATCAGCGGCTTGCTCAACAATGGCTACCCCTGTTGTTTCAACACCCAAAGGTGATCAGAAGAGCACAACTCTTAGTGAAACTATTAAACCTTCATCAGTTGGCAACAACCGAGACTTGAAGGTGAATCAAGATGGGAAATTAAGTACCTTATCAAAGTCTACTAGTAATGTAGGCCGTAAGGGTGTAGAACCTCAAGTCTGTTCAGGGAGAATATATACCAGCGGTGATGAATCTGTACAAGATTTGCAGCCTCGAGAAACAGCCAATCCTGTTGAGAAAACCAGAGATAGCTCTAGTGATCGTGTGAGGACAGATGCCATTGCTAAGGAGTTTGGTCATGCTACAGGATGTTGCACAATTGGTAAAATCCAAGAATCTTGTACTGAAATTAATGTTGCTACCGCAAGTAGTTCTATAGAGGAGATGCATAAAAGTGATAATGTGAAAGCTGCTCTCCAAGCAGCTTTGCTTAGAATGCCTGAAATGTACAAAAAGAAAGAAGTGGCTAATCAAATGGATGAGCTTGGCACAGACGTGAAATGTGAAGCCACAGCTCAAGACCAAGTACTTGGTTCTGGCACGCCAAAGAATAATATATCTGCTGAAGAAATTCTTGATGGGAAGGACGCAATCGAGAGCTCTGCTGCTGCATCTTTGAAATTTTCATCTGGTGAAAAACAGCTTAACTTAAGCCGAAGTGATTCTTGTTCTCAATTAGGAATCTCAGGTGTGGTTGATCCTTCCATTGGAAAGATTGCTGTGAGAGACTTTCCAAATCAACCTTTGGCAATCTCACGTGTTCTTCCAAAGATGGCTGTTCCTGACTATGAATGCATCTGGAAGGGTATCTTTGAGCTACATAGGAGCGGAAAGCCTCCTGACTTGTGTCCTGGAATTCAAGCGCATTTGTCAACTTGTGCTTCCCCAAAGGTTCTTGAAGTGGTGAATAGATTACCATCCAAAATTTCTGTCAGTGAAGTTTCTCGCTCAAGCACGTGGCCTTCACAGTTTAATCAAGGTGGCGCTAAAGAAAATAATATTGCACTTTACTTCTTTGCCCAAGATATTGAAAGTCATGAGAAACACTATGGGGCTCTATTGGATCACATGATGAGGAATGATTTAGCTCTTAAAGGAATCTTTCATGGTGTTGAACTACTCATATTCCCATCCAATCAGCTTCCTGAAAAATCACAGCGTTGGAATATGTTGTTTTTCTTATGGGGTGTGTTTAGGGGGAGAAGGATAAATCATTCAGACTCTGCAGAAAAGACATGTATTCCTAGCTTGAATATGATGCCGGTTAAGAAGGATTTTTCCACTGCCATTGTGACTCTGTCTGAGATCCACTGCTCACCAAAGCAAATGGATGAAGAGTCAATTGCTGGTGATAGGACATATACGGTTCTCCCATCCACTTCCCTAGACCTGGATCAAGCTACAGTAAGTAAGAATTTTGATGGCAAAGAACCTAATCTGGACCGGATACAGTTGGGCTCACAAGTAAACTTAGAGGAGCAAGATAGTAAAATTGACACCAAACCTACATCATGCAGTCTGGCTAGTGGTGCACAGTTATGTCAAGAATTGAAATCTGCTGGTTCATCTGTGAATGGTAGCCCCCTGGAACATGGACAAGCAAAAGAGTCCACACCTTCTCCTGGAGCAATGGGAACAAATGTTACTAGTAGGATTATAGAAACAAAAGTTGATCCTAATATGTCCGTTAAAGAAGAGAAGTCTTTGCTTTCTGAGATCCCTCCTCTTGGCTCTCAAGAGATATGTTTTGCAAGCACTGCCAGTGAGGACAAATTTTCTGAGAGAATGGCAGGTGATATTAAGCAACAAAGGCATATAAAGCAACAGAAAGATGATCAATATATTGACATTGAGACGGCTTTTCAGGGAGAGCTAACTGCAGAAGGGGTGAAGCTTCAGCAACCAAGTGATAGAAGGTTTCAGCATATTGATCTGATGGACACTGCCATGCAGACTTCTGAAGTTTCATGCAAGAGACATTGGAGCGAGGCTGATGTCAAATTAGAAAATGGAGAAAATTCTAGCAAAAAGCTGAAAACAGATGACTGTGGAGCTTTTGGATGTAGCAGTTCTGGAGGTAGAGATTCTTATAGGACCAATTTTGCATCACATAGAAATGGTCTTGGTACCGGTTCTTCAATCAAGGACGAAGGATGTGGTGATATCTGTGATGAGAAAATCATCCTGGAAGACTTGGGAACAATGGAAAGAACTTTCTTTCCTGTTGATGCGCATAACATAAATGATTCTCATTTGGGTTCAAATAGCTTGCCTCATTTGGGTCCAAATAGGTTGTCGTTGAAAGGGCCTCATGTGTGTGATAATCAATTTCATGATGAGATACCAAATTTAGAACTCGGTTTAGGGGGTGAAATGAAACCACCACACAAGGGAATGCTGCCTTTCTTTGTTGGGGAAATAGAAAAGAAGCATTGTCGGGAAAGGCCTCAAGATTGCTTGGCAGATGAGCATGAGGATGATGGTGTTGCAGCATCTCTCTCTCTCTCGTTATCATTTCCATCATCAAACAAAGAGCGTGTTAAAACCGTTTCAAAAGCAGAGCAGGTTTTGCCTGATGGACGCCATGTGAATACTTCGTTGCTTCTTTATGGGAGATTTGCGGAAAAATGA 4434 0.4206 MVSPGSGNITVRYPITQNADMRRESGTCNVCSAPCSSCMHFNRACMGSKVEFSDENCRLAGSNHYSMDEGDISSLRSRVHESIQHADMHSVDSSHDSLSENVDSKQTLSSKCQESKYLEGLDDNTSCISRASDANLANSSHPKIVDKRNVSCSLASVNILGAEGSVSAQSFDMSGLPETPPSKDVDTDESSPKVHSQDAKSQSVKSHSTIPRLMDVERDEDSLIPEKPECSTENADPSLRKVIATSVVSGENPIAVKDNLIDGSNTASRKIYSKSEVDAVNEVGVAPDESHNAAVQDERDKAEQPLRSTGKEEPQSEDQSDESDVVEHDVKVCDICGDAGREDQLAICSRCSDGAEHTYCMREMLQKVPEGDWLCEECKETENQRLDVEERKIPKFSSTPQHSGKRLSENIELAPAPKRQALESSSGSPKSSSPKRAVALPQESSWKSLDKGKVKPDNQMPIRNQSGSDNMETVCSPSGPRSLLRKGLLKSNSFNALNSKPRVKPVDEVIPQKLKGSSENTSKNLETPARMIGKSMSFKSMNLGRSSTTASKVKPLSSKSIPAQDLKGTRLAKDSSAFDRKSLSRVDRSAACSTMATPVVSTPKGDQKSTTLSETIKPSSVGNNRDLKVNQDGKLSTLSKSTSNVGRKGVEPQVCSGRIYTSGDESVQDLQPRETANPVEKTRDSSSDRVRTDAIAKEFGHATGCCTIGKIQESCTEINVATASSSIEEMHKSDNVKAALQAALLRMPEMYKKKEVANQMDELGTDVKCEATAQDQVLGSGTPKNNISAEEILDGKDAIESSAAASLKFSSGEKQLNLSRSDSCSQLGISGVVDPSIGKIAVRDFPNQPLAISRVLPKMAVPDYECIWKGIFELHRSGKPPDLCPGIQAHLSTCASPKVLEVVNRLPSKISVSEVSRSSTWPSQFNQGGAKENNIALYFFAQDIESHEKHYGALLDHMMRNDLALKGIFHGVELLIFPSNQLPEKSQRWNMLFFLWGVFRGRRINHSDSAEKTCIPSLNMMPVKKDFSTAIVTLSEIHCSPKQMDEESIAGDRTYTVLPSTSLDLDQATVSKNFDGKEPNLDRIQLGSQVNLEEQDSKIDTKPTSCSLASGAQLCQELKSAGSSVNGSPLEHGQAKESTPSPGAMGTNVTSRIIETKVDPNMSVKEEKSLLSEIPPLGSQEICFASTASEDKFSERMAGDIKQQRHIKQQKDDQYIDIETAFQGELTAEGVKLQQPSDRRFQHIDLMDTAMQTSEVSCKRHWSEADVKLENGENSSKKLKTDDCGAFGCSSSGGRDSYRTNFASHRNGLGTGSSIKDEGCGDICDEKIILEDLGTMERTFFPVDAHNINDSHLGSNSLPHLGPNRLSLKGPHVCDNQFHDEIPNLELGLGGEMKPPHKGMLPFFVGEIEKKHCRERPQDCLADEHEDDGVAASLSLSLSFPSSNKERVKTVSKAEQVLPDGRHVNTSLLLYGRFAEK 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00016 1477 PANTHER - 330 1032 - -
Accr15g00016 1477 ProSiteProfiles Zinc finger PHD-type profile. 330 381 IPR019787 -
Accr15g00016 1477 MobiDBLite consensus disorder prediction 1120 1147 - -
Accr15g00016 1477 MobiDBLite consensus disorder prediction 572 586 - -
Accr15g00016 1477 MobiDBLite consensus disorder prediction 659 675 - -
Accr15g00016 1477 MobiDBLite consensus disorder prediction 541 689 - -
Accr15g00016 1477 MobiDBLite consensus disorder prediction 459 477 - -
Accr15g00016 1477 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 274 393 IPR013083 -
Accr15g00016 1477 MobiDBLite consensus disorder prediction 414 481 - -
Accr15g00016 1477 MobiDBLite consensus disorder prediction 285 326 - -
Accr15g00016 1477 SUPERFAMILY FYVE/PHD zinc finger 321 382 IPR011011 -
Accr15g00016 1477 MobiDBLite consensus disorder prediction 86 109 - -
Accr15g00016 1477 MobiDBLite consensus disorder prediction 170 237 - -
Accr15g00016 1477 MobiDBLite consensus disorder prediction 389 408 - -
Accr15g00016 1477 MobiDBLite consensus disorder prediction 541 564 - -
Accr15g00016 1477 MobiDBLite consensus disorder prediction 292 316 - -
Accr15g00016 1477 MobiDBLite consensus disorder prediction 421 439 - -
Accr15g00016 1477 MobiDBLite consensus disorder prediction 211 227 - -
Accr15g00016 1477 SMART PHD_3 332 379 IPR001965 -
Accr15g00016 1477 MobiDBLite consensus disorder prediction 587 649 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00016 329 378 C2H2 Transcription Factor Family AT3G01460 38.000 4.99e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00016 - - gmx:100784908 1389.4