Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00816 ATGGATAATCGTGGGGGAGTTGGGAGGGCTGCCTCGGGGAACAGAAGACTGAAAAACCTATTGCTTCAGGAAGACAACCGTTTTTGTGCTGACTGCAATGCTGAAGATCCCAAGTGGGCGTCGGTTAATATTGGAGTTCTTATTTGCTTACACTGTTCTAGCGCACACAGAGGCCTTGGTACTCATATATCAAAGGTTAAGTCCGTGACATTGGATGAATGGTCAGATGATGAAATAGATGCCATGGTTGAAGTTGGAGGGAATGCTTCTGCCAATAAAATTTATGAGGCTCATATTCCAGACGGATATAGCAAGCCCACACCAAATTCCAATAATGTACAGCGTGCAAATTTCATCCGATCCAAGTATGAGGTTCAAGAATTCTTGAAACCTGCGTTGCGCATTGCATCTAGAAAAAGCTCTCAAGGGTCAAATTCTTCCAACAAATTCCGAACCACGAGTGGTCCACAGAAAACGCAAGGATTGGTAGAATATATTGGGTTGCTGAAGGTGAAAGTGGAAAAGGGCACAAATTTAGCTGTTCGAGATATGATGTCCAGTGATCCATATGTCGTCTTAAAACTTGGCCAACAGAGAGTTCAGACAAAGGTAATTAACAGTAACTTGAATCCGGTCTGGAATGAGGAACTTATGCTATCTGTTCCCCAGGAATATGGATCATTGAAATTGCAAGTATATGATCATGATACATTCTCGGCCGATGATATAATGGGAGAGGCAGAAATTGATCTCCAGCCTATGATAACGTCAGCAACGGCATTTGGAAACGCAGAAATGTTTGGCGATATGCAGATTGGAAAATGGTTTAAATCTGATGACAATGCTCTCTTAGAGGATAGCCTAGTCAACATAGTCGATGGAAAGGTTTTGCAGAAAATGAGTCTCAAGCTCCAGAATGTTGAATCTGGAGAATTATATCTAGAACTTGAATGGTTGCCTCTTGATCAATAG 972 0.4198 MDNRGGVGRAASGNRRLKNLLLQEDNRFCADCNAEDPKWASVNIGVLICLHCSSAHRGLGTHISKVKSVTLDEWSDDEIDAMVEVGGNASANKIYEAHIPDGYSKPTPNSNNVQRANFIRSKYEVQEFLKPALRIASRKSSQGSNSSNKFRTTSGPQKTQGLVEYIGLLKVKVEKGTNLAVRDMMSSDPYVVLKLGQQRVQTKVINSNLNPVWNEELMLSVPQEYGSLKLQVYDHDTFSADDIMGEAEIDLQPMITSATAFGNAEMFGDMQIGKWFKSDDNALLEDSLVNIVDGKVLQKMSLKLQNVESGELYLELEWLPLDQ 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00816 323 CDD C2_ArfGAP 166 310 - -
Accr14g00816 323 SMART arf_gap_3 14 136 IPR001164 GO:0005096
Accr14g00816 323 FunFam ADP-ribosylation factor GTPase-activating protein AGD12 165 323 - -
Accr14g00816 323 Pfam Putative GTPase activating protein for Arf 15 130 IPR001164 GO:0005096
Accr14g00816 323 ProSiteProfiles C2 domain profile. 155 264 IPR000008 -
Accr14g00816 323 CDD ArfGap 17 123 - -
Accr14g00816 323 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 9 323 IPR044518 GO:0005096|GO:0005543
Accr14g00816 323 MobiDBLite consensus disorder prediction 137 156 - -
Accr14g00816 323 ProSiteProfiles ARF GTPase-activating proteins domain profile. 14 142 IPR001164 GO:0005096
Accr14g00816 323 Pfam C2 domain 168 256 IPR000008 -
Accr14g00816 323 SMART C2_3c 168 263 IPR000008 -
Accr14g00816 323 FunFam Arf-GAP with dual PH domain-containing protein 1 9 137 - -
Accr14g00816 323 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 165 320 IPR035892 -
Accr14g00816 323 PRINTS HIV Rev interacting protein signature 66 87 IPR001164 GO:0005096
Accr14g00816 323 PRINTS HIV Rev interacting protein signature 26 45 IPR001164 GO:0005096
Accr14g00816 323 PRINTS HIV Rev interacting protein signature 45 62 IPR001164 GO:0005096
Accr14g00816 323 Gene3D C2 domain 164 323 IPR035892 -
Accr14g00816 323 SUPERFAMILY ArfGap/RecO-like zinc finger 15 131 IPR037278 -
Accr14g00816 323 Gene3D Arf GTPase activating protein 7 135 IPR038508 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00816 5 323 C2H2 Transcription Factor Family AT4G21160 66.867 7.12e-170 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00816 K12486 - qsa:O6P43_013125 478.018