Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00811 ATGACTTCATCTGATCATGACCTCATTGATAACGAAGCTAATGAGCAGCAACAGCAATCAAGCTCAGAGATGCAGTCTTCATCTACAAACGGAATTTCTGATTCAGGTATTGCTACCCAGAATGCTCAGTATGCAGTGCCTCCTTCACAGATTGGAACTGGATCTGCTATGGCACCAGTTTATCCATACCCAGATCCTTACTACAGGAGCATCTTTGCTCCATATGAGACGCAACCTTATCCCCCACAACCCTATGGAGCACAACCAATGCAGGTTCATCTTCAGTTAATGGGAATTCAACAAGCTGGTGTTCCTCTACCATCAGATGCAGTTGAGGAGCCGGTATTTGTCAATGCAAAACAGTACCATGGTATATTGAGACGTAGACAGTCTCGTGCCAAAGCTGAATCATTAAATAAAGCTATGAAGAATCGCAAGCCATACTTGCATGAATCACGGCATTTACATGCACTGAGAAGAGCTCGAGGATGTGGAGGTCGGTTTGTTAATTCAAAGAAAAGCGAGGGCCAACAGGATGAGGTGTCATCAACAGATAAATCACTGTCCAACACCAATCTCAATCCTGACCAAAAGGATATTGCTTCATCAGATAGGATTTCCTAA 624 0.4359 MTSSDHDLIDNEANEQQQQSSSEMQSSSTNGISDSGIATQNAQYAVPPSQIGTGSAMAPVYPYPDPYYRSIFAPYETQPYPPQPYGAQPMQVHLQLMGIQQAGVPLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESLNKAMKNRKPYLHESRHLHALRRARGCGGRFVNSKKSEGQQDEVSSTDKSLSNTNLNPDQKDIASSDRIS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00811 207 ProSiteProfiles NF-YA/HAP2 family profile. 111 171 IPR001289 GO:0003700|GO:0006355
Accr14g00811 207 MobiDBLite consensus disorder prediction 166 207 - -
Accr14g00811 207 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 113 168 IPR001289 GO:0003700|GO:0006355
Accr14g00811 207 PRINTS CCAAT-binding transcription factor subunit B signature 114 136 IPR001289 GO:0003700|GO:0006355
Accr14g00811 207 PRINTS CCAAT-binding transcription factor subunit B signature 145 168 IPR001289 GO:0003700|GO:0006355
Accr14g00811 207 ProSitePatterns NF-YA/HAP2 subunit signature. 116 136 IPR018362 GO:0003677|GO:0016602
Accr14g00811 207 MobiDBLite consensus disorder prediction 13 44 - -
Accr14g00811 207 Gene3D - 111 172 - -
Accr14g00811 207 SMART cbf3 110 171 IPR001289 GO:0003700|GO:0006355
Accr14g00811 207 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 14 196 IPR001289 GO:0003700|GO:0006355
Accr14g00811 207 MobiDBLite consensus disorder prediction 1 44 - -
Accr14g00811 207 MobiDBLite consensus disorder prediction 171 201 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00811 1 203 CCAAT-HAP2 Transcription Factor Family AT1G30500 57.561 2.65e-69 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Accr14g00811 CBFB_NFYA 5.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00811 K08064 - gmx:100809036 290.812