Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00798 ATGAAAGAAGGAGGAAGGAAGCAGGGTGCTGCGTCACCGTGTGCGGCTTGCAAGCTGCTTCGAAGAAGATGTGCTAATGACTGTGTCTTCGCTCCTTATTTCCCCGCTGATGAGCCTCACAAGTTCGCTAATGTCCACAAAGTCTTCGGTGCCAGTAATGTCAACAAGATGCTTCAGGAGCTACCACTGTATCAAAGAGGGGATGCAGTGAGCAGTATGGTGTATGAGGCAAATGCAAGAGTGAGAGATCCAGTATATGGGTGTGTTGGGGCCATCTCTTCTCTTCAGCAACAGATTGATTTGCTTCAGACCCAATTGGCCTTAGCCCAGGCTGAGGTGGTTCATCTTAGGGTCAGCCAATCTGCTTCCCTTTCCAACCACGGGCTCAGCCCAACTAGCAGCGACTCGCCGCCGCCGCCTTCAAAGTCCATTCTCGACATGGACTTTGTGATGGACCAGTCCACTTACTCTGATTCAATGTGGCCCTGCTAG 492 0.5142 MKEGGRKQGAASPCAACKLLRRRCANDCVFAPYFPADEPHKFANVHKVFGASNVNKMLQELPLYQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLALAQAEVVHLRVSQSASLSNHGLSPTSSDSPPPPSKSILDMDFVMDQSTYSDSMWPC 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00798 163 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Accr14g00798 163 Coils Coil 92 112 - -
Accr14g00798 163 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 126 - -
Accr14g00798 163 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Accr14g00798 163 MobiDBLite consensus disorder prediction 124 145 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00798 1 163 AS2 family AT1G31320 71.512 1.08e-77 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr14g00798 LOB 6e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00798 - - cpap:110806897 235.343