Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00790 ATGGCGCATTCTGCAGAACCTTCATCATCTTTAAGCTTTACCTCATCTTCCCATTTATCAAATGGCTCTGTTAGCCACAACATGTGCTCTTCTCACGGCTCTGAACCTGTACCCAACCTTGAAGTGATCAGTTTGAGTAAGCTAAGCTCAAGTTTGGAGCAGCTTTTACTTGAATCTGATGTTGACTTGAGTGATGCCGACATCGTTGTTGAAGGAGAAACAGTTGGTGTTCATCGATGTATTCTGGCCTCTAGAAGCAATTTTTTCAACAAATTATTCAAGAAAGATAAAGGGTCTTCACAGAAAGAAGGAAAATTGAAGTATTGCATGAATGACTTGTTGCCATATGGCAAGGTGGGACTTGAAGCATTTCAAATATTCTTGAGCTATATATATACAGGAAAACTCAAGCCCTCTCCAATGGAAGTGTCAACTTGCGTTGATCATGTTTGTGTCCATGATGCTTGTAGACCAGCAATAAATTTTGCTGTGGAGTTGATGTACGCCTCTTCCATCTTTCAAATACCAGAATTGGTATCACTTTTTCAGCGACGCCTCCTTAATTTTGTAGGGAAGGCTTTTGTGGAAGATGTCATCCCAATACTCACTGTTGCTTTTCATTGTCAATTGAGTGAACTTGTCACTCGATGTGTTGATAGGGTAGCACGATCAAACCTTGATCAAACCTCGATTGAGAAAGAGCTTCCCTTAGAACTTGCAGCTAAAGTTAAACTGCTCCGCCGCAACTACCATCACGATGTTGAAAATAACACCTCCGTTGTTGATGACCCAATTCGTCAGAAGAGAATCACTAGAATACATAAGGCTCTAGATTCAGATGATGTCGAGCTTGTTAAACTGCTTTTATCTGAATCAGAGATGAAATTGGATGAAGCCAGTGCTCTTCATTATGCTGCAGCCTACTGTGATCCCAAGGTTGTTTCTGAGGTTCTAGGTTTGGGGATGGCTGATGTCAATCTTCGGAATTCTCGGGGCTACACTGTGCTTCACATTGCTGCCATGCGTAAGGAGCCTTCAATTATTGTATCCCTTCTAACAAAAGGGGCTTGTGCATCAGAGGTGACTTATGATGGTCAGAGTGCTGTTACCATCTGCAGGAGATTAACAAGACCAAAGGACTATCATGCGAAAACAGAGAAGGGGAAAGAAACAAACAAAGATCGCATATGCATCGATGTTCTTGAAAGAGAAGTGCGGAGAAACCCAATGGCTGGGGATGCCATAATTTCCTCCCACACAATGGCTGATGATCTGCACATGAAGCTACTATATCTTGAGAATAGAGTGGCATTTGCGAAAGTATTCTTCCCTTCAGAAGCCAAATTAGCTATCGACATTGCACATGCCCAGACATCTGAGTTTGCAGGTCTTTCTGCATCAAAAGGTTCAAACGGGAATTTGAGGGAGGTTGATCTAAATGAAACTCCCCTGGCGCAGAATAAAAGACTTCTTACCAGGATGCAGACCCTTATGAAAACAGTTGAGATGGGCCGGCGCTATTTTCCTCATTGCTCAGAAGTGCTTGACAAGTTCATGGAGGACGACCTGCCTGATCTGTTTTACCTGGAGAAGGGCACGCCGGATGAGCAGAAAATCAAGAGAGCACGTTTCATGGAGCTCAAAGAAGATGTTCAGAAGGCTTTCAACAAGGACAAAGCTAATGGGATGCCGGCATCATCGTCCTCATCATCTTTGAGAGGCTCTGTAAATTACAAGGCTAGGAAAGTTTAA 1752 0.4292 MAHSAEPSSSLSFTSSSHLSNGSVSHNMCSSHGSEPVPNLEVISLSKLSSSLEQLLLESDVDLSDADIVVEGETVGVHRCILASRSNFFNKLFKKDKGSSQKEGKLKYCMNDLLPYGKVGLEAFQIFLSYIYTGKLKPSPMEVSTCVDHVCVHDACRPAINFAVELMYASSIFQIPELVSLFQRRLLNFVGKAFVEDVIPILTVAFHCQLSELVTRCVDRVARSNLDQTSIEKELPLELAAKVKLLRRNYHHDVENNTSVVDDPIRQKRITRIHKALDSDDVELVKLLLSESEMKLDEASALHYAAAYCDPKVVSEVLGLGMADVNLRNSRGYTVLHIAAMRKEPSIIVSLLTKGACASEVTYDGQSAVTICRRLTRPKDYHAKTEKGKETNKDRICIDVLEREVRRNPMAGDAIISSHTMADDLHMKLLYLENRVAFAKVFFPSEAKLAIDIAHAQTSEFAGLSASKGSNGNLREVDLNETPLAQNKRLLTRMQTLMKTVEMGRRYFPHCSEVLDKFMEDDLPDLFYLEKGTPDEQKIKRARFMELKEDVQKAFNKDKANGMPASSSSSSLRGSVNYKARKV 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00790 583 MobiDBLite consensus disorder prediction 555 583 - -
Accr14g00790 583 SUPERFAMILY Ankyrin repeat 201 374 IPR036770 -
Accr14g00790 583 CDD BTB_POZ_NPR_plant 60 190 - -
Accr14g00790 583 SMART ANK_2a 297 327 IPR002110 GO:0005515
Accr14g00790 583 SMART ANK_2a 331 363 IPR002110 GO:0005515
Accr14g00790 583 SMART ANK_2a 268 296 IPR002110 GO:0005515
Accr14g00790 583 ProSiteProfiles Ankyrin repeat profile. 331 356 IPR002110 GO:0005515
Accr14g00790 583 Pfam NPR1/NIM1 like defence protein C terminal 373 571 IPR021094 -
Accr14g00790 583 MobiDBLite consensus disorder prediction 561 576 - -
Accr14g00790 583 Pfam BTB/POZ domain 59 179 IPR000210 GO:0005515
Accr14g00790 583 PANTHER REGULATORY PROTEIN NPR3 10 572 IPR044292 GO:0009862|GO:2000022|GO:2000031
Accr14g00790 583 SMART BTB_4 64 190 IPR000210 GO:0005515
Accr14g00790 583 FunFam Regulatory protein NPR3 38 222 - -
Accr14g00790 583 FunFam regulatory protein NPR3-like 265 405 - -
Accr14g00790 583 SUPERFAMILY POZ domain 49 188 IPR011333 -
Accr14g00790 583 ProSiteProfiles Ankyrin repeat region circular profile. 331 356 - -
Accr14g00790 583 ProSiteProfiles BTB domain profile. 64 140 IPR000210 GO:0005515
Accr14g00790 583 Gene3D - 264 405 IPR036770 -
Accr14g00790 583 Gene3D Potassium Channel Kv1.1; Chain A 37 222 IPR011333 -
Accr14g00790 583 Pfam Ankyrin repeats (3 copies) 274 356 IPR002110 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Accr14g00790 NPR1_like_C 1.1e-89 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00790 K14508 - gmx:100217338 884.404