Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00789 ATGATGGCGCATTCTGCAGAACCTTCATCATCTTTAAGCTTTACCTCATCTTCCCATTTATCAAATGGCTCTGTTAGCCACAACATGTGCTCTTCTCACGGCTCTGAACCTGTACCCAACCTTGAAGTGATCAGTTTGAGTAAGCTAAGCTCAAGTTTGGAGCAGCTTTTACTTGAATCTGATGTTGACTTGAGTGATGCCGACATCGTTGTTGAAGGAGAAACAGTTGGTGTTCATCGATGTATTCTGGCCTCTAGAAGCAATTTTTTCAACAAATTATTCAAGAAAGATAAAGGGTCTTCACAGAAAGAAGGAAAATTGAAGTATTGCATGAATGACTTGTTGCCATATGGCAAGGTGGGACTTGAAGCATTTCAAATATTCTTGAGCTATATATATACAGGAAAACTCAAGCCCTCTCCAATGGAAGTGTCAACTTGCGTTGATCATGTTTGTGTCCATGATGCTTGTAGACCAGCAATAAATTTTGCTGTGGAGTTGATGTACGCCTCTTCCATCTTTCAAATACCAGAATTGGTATCACTTTTTCAGCGACGCCTCCTTAATTTTGTAGGGAAGGCTTTTGTGGAAGATGTCATCCCAATACTCACTGTTGCTTTTCATTGTCAATTGAGTGAACTTGTCACTCGATGTGTTGATAGGGTAGCACGATCAAACCTTGATCAAACCTCGATTGAGAAAGAGCTTCCCTTAGAACTTGCAGCTAAAGTTAAACTGCTCCGCCGCAACTACCATCACGATGTTGAAAATAACACCTCCGTTGTTGATGACCCAATTCGTCAGAAGAGAATCACTAGAATACATAAGGCTCTAGATTCAGATGATGTCGAGCTTGTTAAACTGCTTTTATCTGAATCAGAGATGAAATTGGATGAAGCCAGTGCTCTTCATTATGCTGCAGCCTACTGTGATCCCAAGGTTGTTTCTGAGGTTCTAGGTTTGGGGATGGCTGATGTCAATCTTCGGAATTCTCGGGGCTACACTGTGCTTCACATTGCTGCCATGCGTAAGGAGCCTTCAATTATTGTATCCCTTCTAACAAAAGGGGCTTGTGCATCAGAGGTGACTTATGATGGTCAGAGTGCTGTTACCATCTGCAGGAGATTAACAAGACCAAAGGACTATCATGCGAAAACAGAGAAGGGGAAAGAAACAAACAAAGATCGCATATGCATCGATGTTCTTGAAAGAGAAGTGCGGAGAAACCCAATGGCTGGGGATGCCATAATTTCCTCCCACACAATGGCTGATGATCTGCACATGAAGCTACTATATCTTGAGAATAGAGTGGCATTTGCGAAAGTATTCTTCCCTTCAGAAGCCAAATTAGCTATCGACATTGCACATGCCCAGACATCTGAGTTTGCAGGTCTTTCTGCATCAAAAGGTTCAAACGGGAATTTGAGGGAGGTTGATCTAAATGAAACTCCCCTGGCGCAGAATAAAAGACTTCTTACCAGGATGCAGACCCTTATGAAAACAGTTGAGATGGGCCGGCGCTATTTTCCTCATTGCTCAGAAGTGCTTGACAAGTTCATGGAGGACGACCTGCCTGATCTGTTTTACCTGGAGAAGGGCACGCCGGATGAGCAGAAAATCAAGAGAGCACGTTTCATGGAGCTCAAAGAAGATGTTCAGAAGGCTTTCAACAAGGACAAAGCTAATGGGATGCCGGCATCATCGTCCTCATCATCTTTGAGAGGCTCTGTAAATTACAAGGCTAGGAAAGTTTAA 1755 0.4291 MMAHSAEPSSSLSFTSSSHLSNGSVSHNMCSSHGSEPVPNLEVISLSKLSSSLEQLLLESDVDLSDADIVVEGETVGVHRCILASRSNFFNKLFKKDKGSSQKEGKLKYCMNDLLPYGKVGLEAFQIFLSYIYTGKLKPSPMEVSTCVDHVCVHDACRPAINFAVELMYASSIFQIPELVSLFQRRLLNFVGKAFVEDVIPILTVAFHCQLSELVTRCVDRVARSNLDQTSIEKELPLELAAKVKLLRRNYHHDVENNTSVVDDPIRQKRITRIHKALDSDDVELVKLLLSESEMKLDEASALHYAAAYCDPKVVSEVLGLGMADVNLRNSRGYTVLHIAAMRKEPSIIVSLLTKGACASEVTYDGQSAVTICRRLTRPKDYHAKTEKGKETNKDRICIDVLEREVRRNPMAGDAIISSHTMADDLHMKLLYLENRVAFAKVFFPSEAKLAIDIAHAQTSEFAGLSASKGSNGNLREVDLNETPLAQNKRLLTRMQTLMKTVEMGRRYFPHCSEVLDKFMEDDLPDLFYLEKGTPDEQKIKRARFMELKEDVQKAFNKDKANGMPASSSSSSLRGSVNYKARKV 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00789 584 ProSiteProfiles Ankyrin repeat region circular profile. 332 357 - -
Accr14g00789 584 MobiDBLite consensus disorder prediction 562 577 - -
Accr14g00789 584 SMART ANK_2a 332 364 IPR002110 GO:0005515
Accr14g00789 584 SMART ANK_2a 298 328 IPR002110 GO:0005515
Accr14g00789 584 SMART ANK_2a 269 297 IPR002110 GO:0005515
Accr14g00789 584 Pfam NPR1/NIM1 like defence protein C terminal 374 572 IPR021094 -
Accr14g00789 584 FunFam regulatory protein NPR3-like 266 406 - -
Accr14g00789 584 Pfam BTB/POZ domain 60 180 IPR000210 GO:0005515
Accr14g00789 584 ProSiteProfiles BTB domain profile. 65 141 IPR000210 GO:0005515
Accr14g00789 584 PANTHER REGULATORY PROTEIN NPR3 11 573 IPR044292 GO:0009862|GO:2000022|GO:2000031
Accr14g00789 584 SMART BTB_4 65 191 IPR000210 GO:0005515
Accr14g00789 584 Pfam Ankyrin repeats (3 copies) 275 357 IPR002110 GO:0005515
Accr14g00789 584 SUPERFAMILY Ankyrin repeat 202 375 IPR036770 -
Accr14g00789 584 MobiDBLite consensus disorder prediction 556 584 - -
Accr14g00789 584 SUPERFAMILY POZ domain 50 189 IPR011333 -
Accr14g00789 584 CDD BTB_POZ_NPR_plant 61 191 - -
Accr14g00789 584 ProSiteProfiles Ankyrin repeat profile. 332 357 IPR002110 GO:0005515
Accr14g00789 584 FunFam Regulatory protein NPR3 39 223 - -
Accr14g00789 584 Gene3D Potassium Channel Kv1.1; Chain A 38 223 IPR011333 -
Accr14g00789 584 Gene3D - 265 406 IPR036770 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Accr14g00789 NPR1_like_C 1.1e-89 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00789 K14508 - gmx:100217338 884.404