Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00788 ATGGAAAGAGGTGGATATGGTTACGGTCGCTCTGGCGGCTACCGAGGAGGGCCAAGAGGCCGGAATGGCGGTAGATCAGGTGGAGGACCACCGCGAGGCGGTGGTGGAAGTGGCTTCCGTCACCAATCGCAGCCTCACAGTGATCGTTCTTGGGGTGAGGACACAAGGAGAGGGGGTTATGGCAGGGGAGGATTTGATAGAGGAGGAAGAGGCAGAGGTAGTGGCAGAAATGCTGCTGGATCATCTTCAGTCTGGGTAGCCAGTGAATCGCCTCAATCTAGTCATTCTGCTTCCGATCCAGTTCCTGAATTGGAGCAACTACAAATATCGGAACCGGTTCTAAACTTGAGTCATACCCAGGATGCAGAAGATAAGATTTTCCCCATTCGTAGGCCCGACAAGGGTGGTATCTTAAAAATTCGAACTAGCCAGCTTCGTGTCAATCACTTTCCTATCAGGTTTAGACCTGATACCATACTGATGCATTACAATGTTGACGTGAAGCCCATTTCATCGGTTAGAGCTGGTCGACCTCAAAAGATTTCAAAGTCTGACCTCTCTATGATTAGGGAGGCATTGTTTTCTAATGACACTAGGTTGTCATTGGAGAAGACAGTGTACGATGGAGATAAGAATATTCTCAGTGCGATTCCTCTTCCAGAAGAAACCTTCACGGTTACGATCTCAGCAGGAGAGGATGAAAGAAGCAATTCATATCAGGTCACCTTAACACTTGTTAACAAGCTTGAATATCGCAAGTTGAGTCGATATCTGAATAAGGAGTCTATGTCAGTTCCAAGAGACATTTTGCAAGGGATGGATATAGTGTTCAAAGAAAATCCAGCCAAGCGTACAATCGGCGTGGGACGTTGCTTCTATCCTTCAAATCCTCCTTTGTTACATCAGGATTTTCACAATGGCATAATTGCTCTAGGGGGATTTCAACAGAGTTTGAAGCCCACATCTCAGGGTTTGTCCTTATGTCTGGACTACTCTGTTTTATCTTTTCGAAAGCGAATGTCAGTCTTGGATTTCCTATATGAGCGGATTTATGGCTTCAGATTAGAAGAATTTGGACGTTTTTGGAAGCCTGTTGCGGCGGAACTGATTGGGTTGAAGGTAAACGTGACACACCGTAGAACCAGACAAAAGTACACCATTGTAGGATTTTCAGATCGTGACACAAGGTATATCACCTTTCCTCTTAAGGACCCTGAGGGCAGAAGTGAACCACAAGAAGTCTCAATCCTTGACTATTTCTGGGATAAATACAATAAGGATATTGAATACAAAGATATTCCTTGTTTAGATTTTGGGAAAGGCGTCTTAGTGCCGATGGAGTTTTGCATCGTAGTAGAGGGTCAGAGATATCCCAAAGAGAATTTGGATAGAAATGCTTCCAAGACCTTGAAAGATATGTCGTTGGCCCCTCCAAAGGACAGACAACGTGCCATACAAACGATGGTGGGGTCAAGCGACGGACCTTGCGGTGGTGGTATTATTCAAAACTTTGGAATGGAAGTCAACACAACCATGACTGCTGTTTTGGGACGCATTATTGAACCACCAAATCTAAAAGTAGGTGGTCGAAATGGCCAGATTATGACCGTTACATTGGATCCGGACAGATGTCAATGGAATCTGGTCGGAAAATCTGTGATGAAAGGCAAGCCAGTTGAGCGTTGGGGTATTATTGATTTCACAAGCTCAGAGAGAGATTTCCGGTTCAAATTAAGATGCAAGGAATTCATTCCTAAACTCAAGGAGAAATTTAGAAGTTTGGGCATTGACATGAAAGATCCTCTCTGGGTTGAGGGATCTTCAATGCATCAACTTGAAAGACATGATTCGCTTTCTGCATTACTTAAGAAAGTGCACAATTGGGGTCAAGTGCAATTTATTCTGTGTGTGATGTCTCAGAAGCACTTTGGATATAAGGCACTCAAGTGGATTTCAGAGACCAAGGTTGGTGTTGTGACACAGTGTTGTTTAACTAATACTGTGAATGCAGGGAAAGATCAGAATCTTACAAATCTTGCCCTCAAGATCAACGCCAAACTTGGAGGTAGTAATGTTGAGCTTGAGAGTAGGCCCCCTTGCTTTGCCGGTGATGATGGGCATGTTATGTTTATAGGGGCTGATGTCAATCATCCTGCTGCCAGAGACGTCAATAGTCCATCCATTACTGCGGTTGTTGGAACTGTCAATTGGCCTGCCGCAAATCGCTACGCGGCACGGGTCAGCCCTCAACCCCATAGAAAAGAAAAAATATTGAATTTTGGGACAATTTGCCTTGAGCTTGTTGACTGTTACGCCAGGTTTAACAAAGTGAGACCCAAAAAAATTGTTATTTTCCGTGATGGGGTTAGCGATGGTCAATTTGACATGGTTCTCAATGAAGAACTCCGAGATCTGAAAAGTGTTTTCCAAAATGCAAAGTATTTTCCAACTATCACTTTGGTCGTAGCACAGAAGCGACATCAAACTCGCTTGTTTCGAGAGGAGCCTTCTTTCGGAAATGTGTCCCCTGGAACAGTGGTGGACACCAAAGTGGTACACCCTTTTGAGTTTGATTTCTACCTCTGCAGTCACTATGGAAGCTTAGGGACCAGCAAGCCCACCCACTATCACGTCTTGTGGGATGAGCACAGGTTTACCTCTGATGATTTACAGAAACTTATATATGATATGTGTTTTACCTTTGCGAGGTGCACTAAACCTGTATCTTTGGTCCCTCCTGTGTACTATGCTGACCTTGTTGCTTATCGAGGACGACTATACTATGAGGCAAAGGTTGAGTTAGAGAGCTTTAAGAAGCCAGCATCGTTTGCTGCTTCTTCATCTGCAAATGAAGACAAGAATTTCAAGCTGCATGAGAACCTGGAGGACATAATGTTCTTTGTCTGA 2907 0.4427 MERGGYGYGRSGGYRGGPRGRNGGRSGGGPPRGGGGSGFRHQSQPHSDRSWGEDTRRGGYGRGGFDRGGRGRGSGRNAAGSSSVWVASESPQSSHSASDPVPELEQLQISEPVLNLSHTQDAEDKIFPIRRPDKGGILKIRTSQLRVNHFPIRFRPDTILMHYNVDVKPISSVRAGRPQKISKSDLSMIREALFSNDTRLSLEKTVYDGDKNILSAIPLPEETFTVTISAGEDERSNSYQVTLTLVNKLEYRKLSRYLNKESMSVPRDILQGMDIVFKENPAKRTIGVGRCFYPSNPPLLHQDFHNGIIALGGFQQSLKPTSQGLSLCLDYSVLSFRKRMSVLDFLYERIYGFRLEEFGRFWKPVAAELIGLKVNVTHRRTRQKYTIVGFSDRDTRYITFPLKDPEGRSEPQEVSILDYFWDKYNKDIEYKDIPCLDFGKGVLVPMEFCIVVEGQRYPKENLDRNASKTLKDMSLAPPKDRQRAIQTMVGSSDGPCGGGIIQNFGMEVNTTMTAVLGRIIEPPNLKVGGRNGQIMTVTLDPDRCQWNLVGKSVMKGKPVERWGIIDFTSSERDFRFKLRCKEFIPKLKEKFRSLGIDMKDPLWVEGSSMHQLERHDSLSALLKKVHNWGQVQFILCVMSQKHFGYKALKWISETKVGVVTQCCLTNTVNAGKDQNLTNLALKINAKLGGSNVELESRPPCFAGDDGHVMFIGADVNHPAARDVNSPSITAVVGTVNWPAANRYAARVSPQPHRKEKILNFGTICLELVDCYARFNKVRPKKIVIFRDGVSDGQFDMVLNEELRDLKSVFQNAKYFPTITLVVAQKRHQTRLFREEPSFGNVSPGTVVDTKVVHPFEFDFYLCSHYGSLGTSKPTHYHVLWDEHRFTSDDLQKLIYDMCFTFARCTKPVSLVPPVYYADLVAYRGRLYYEAKVELESFKKPASFAASSSANEDKNFKLHENLEDIMFFV 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00788 968 SMART PAZ_2_a_3 340 476 IPR003100 GO:0005515
Accr14g00788 968 SUPERFAMILY PAZ domain 336 490 IPR036085 GO:0005515
Accr14g00788 968 ProSiteProfiles Piwi domain profile. 633 929 IPR003165 GO:0003676
Accr14g00788 968 MobiDBLite consensus disorder prediction 46 63 - -
Accr14g00788 968 SMART DUF1785_2 286 339 IPR014811 -
Accr14g00788 968 Pfam PAZ domain 360 467 IPR003100 GO:0005515
Accr14g00788 968 SUPERFAMILY Ribonuclease H-like 621 929 IPR012337 -
Accr14g00788 968 CDD PAZ_argonaute_like 340 452 - -
Accr14g00788 968 MobiDBLite consensus disorder prediction 1 102 - -
Accr14g00788 968 Pfam Argonaute linker 1 domain 287 338 IPR014811 -
Accr14g00788 968 Gene3D - 704 968 IPR036397 GO:0003676
Accr14g00788 968 Gene3D paz domain 335 457 - -
Accr14g00788 968 Pfam Piwi domain 634 928 IPR003165 GO:0003676
Accr14g00788 968 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 142 931 - -
Accr14g00788 968 MobiDBLite consensus disorder prediction 76 102 - -
Accr14g00788 968 CDD Piwi_ago-like 500 928 IPR045246 -
Accr14g00788 968 ProSiteProfiles PAZ domain profile. 365 453 IPR003100 GO:0005515
Accr14g00788 968 Pfam N-terminal domain of argonaute 143 276 IPR032474 -
Accr14g00788 968 SMART Piwi_a_2 633 929 IPR003165 GO:0003676
Accr14g00788 968 Gene3D - 519 696 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00788 79 967 Eukaryotic Initiation Factors Gene Family AT1G48410 33.645 8.71e-141 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00788 K11593 - gmx:100805250 1123.61