Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr14g00781 | ATGGAGGATCACGTGGGTTTAGGAGGTGGAGCATCTGTTAATATCGGAAGGGAGGAAGAAGATGATGAATTTTGCAGTTGTTGTGAAGACGATGAAGAAGAACTATGGAAAGAGTCTGAGCAGCCAGTGGTGGAAAAGTTGAAGGAGGACTGTGATGAATATTCGGTAAAAATGTTCTTCAAGGGCTTGTCTATAGGTGGGGTTGAAAATTCCACTTCTGGGTATTCTGGAATTGGAGTGGTCATGGAAAGACCATCCGGTCTTCCAGCTATCCAGGTGCAGAAAAAACTCGATTTTTATGCCGAAAAGCTATTAGCTGAATACTTGGCTCTCATCGATGGCTTGCTGGAAGCTATGCAGAATAATATCCGCCGGGTTTACGCTTTTACAGATTCCGAATTATTGTACGATCAGATAACGTTTGAGAAGAATCTTGAGATGCCACTTTTGATAGCACTGAGAGAGAGGGTTCTGGAGCATGCCAATAACTTTGAATCATTTGTTCTTAATTTTGTTCCTAGCATTGATCTTGAGAAACCGCTGCAATTAGCTAAAGTAGCTATTGGCCTTGTCTCTCTTCCTATAGATGGTGGGAAAGTGGTTGAAAACTGTTCTATTTGTTGTGAAGACAAGCCATTGTATATAATGATCACCATGAAATGTTCGCACAAATTTTGTTCACATTGTTTGAGGGCTTATGTTGATGATAAAGTACAGTCTTGTCAAGTCCCTATAAGATGCCCTCAACCAAGATGCAAATATTACATCTCTACTGCAGAATGCAGGTCTTTTCTTCCATTTACCTCATTTGAATCTTTGGAGAAAGCCCTTGCAGAAGCAAATTTTTCAGATAGAATTTACTGCCCATTTCCAAATTGCTCTGTTCTCCTTGATCCTCGTGAATGTTTATCAGCTAGGGCTAGTTCATCTTCTAGCCAATCAGACAATTCTTGTGTTGAGTGTCCTGTTTGTCAGAGGTTTATCTGTGTGGACTGTGAGGTTCCTTGGCATTCTTCTATGAGCTGTGATGAGTACCAGAATTTACCAGAGGAGGAGAGAGATGCTTCTGACATTACCTTGCATCGACTAGCTCAAAATAAACGATGGAAACGTTGTCAGCAGTGTCGGCGGATGATTGAGCTTACTCATGGTTGTTATCACATGACATGCTGGTGTGGTCATGAGTTCTGCTATTCTTGTGGAGCGGAATACAGGGATGGCCAACAGACGTGTCAGTGTGTGTTTTGGGATGAAGACAACTCCGAAGACTCAGTGACTCACTCTCTTCAAGAATCAGAACAATGGGCATGGGAGACTTTCAATTCTCTCCCCATGATCATGGATGCATACTCAGACCAAGAACGTTCGCAGCTTGCACTTATTCAACGATTCCTTGCCGGGGGTTTCAGTCTGAGTGACCATCATCCTTATCAATCCCCTCCCCGCTGTACAGACTCCTATGTTGACGCCATGAAGGATCTACATCAGCTTCCGTGGCTTGAGCGATTTGTCTCTGTCATAAGTGACGTCTCCGTCATAAGTGACAACTACTATGAAGATTATATTCAGTAA | 1572 | 0.4268 | MEDHVGLGGGASVNIGREEEDDEFCSCCEDDEEELWKESEQPVVEKLKEDCDEYSVKMFFKGLSIGGVENSTSGYSGIGVVMERPSGLPAIQVQKKLDFYAEKLLAEYLALIDGLLEAMQNNIRRVYAFTDSELLYDQITFEKNLEMPLLIALRERVLEHANNFESFVLNFVPSIDLEKPLQLAKVAIGLVSLPIDGGKVVENCSICCEDKPLYIMITMKCSHKFCSHCLRAYVDDKVQSCQVPIRCPQPRCKYYISTAECRSFLPFTSFESLEKALAEANFSDRIYCPFPNCSVLLDPRECLSARASSSSSQSDNSCVECPVCQRFICVDCEVPWHSSMSCDEYQNLPEEERDASDITLHRLAQNKRWKRCQQCRRMIELTHGCYHMTCWCGHEFCYSCGAEYRDGQQTCQCVFWDEDNSEDSVTHSLQESEQWAWETFNSLPMIMDAYSDQERSQLALIQRFLAGGFSLSDHHPYQSPPRCTDSYVDAMKDLHQLPWLERFVSVISDVSVISDNYYEDYIQ | 523 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr14g00781 | 523 | FunFam | RBR-type E3 ubiquitin transferase | 199 | 284 | - | - | |
Accr14g00781 | 523 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 200 | 283 | IPR013083 | - | |
Accr14g00781 | 523 | PANTHER | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | 75 | 464 | IPR031127 | GO:0004842|GO:0016567 | |
Accr14g00781 | 523 | Pfam | IBR domain, a half RING-finger domain | 362 | 411 | IPR002867 | GO:0008270 | |
Accr14g00781 | 523 | Pfam | IBR domain, a half RING-finger domain | 282 | 342 | IPR002867 | GO:0008270 | |
Accr14g00781 | 523 | Gene3D | - | 340 | 465 | - | - | |
Accr14g00781 | 523 | Pfam | Reverse transcriptase-like | 70 | 173 | IPR002156 | GO:0003676|GO:0004523 | |
Accr14g00781 | 523 | Gene3D | - | 56 | 190 | IPR036397 | GO:0003676 | |
Accr14g00781 | 523 | ProSiteProfiles | TRIAD supradomain profile. | 200 | 417 | IPR044066 | - | |
Accr14g00781 | 523 | CDD | BRcat_RBR_unk | 283 | 345 | - | - | |
Accr14g00781 | 523 | FunFam | RBR-type E3 ubiquitin transferase | 340 | 465 | - | - | |
Accr14g00781 | 523 | SUPERFAMILY | RING/U-box | 203 | 280 | - | - | |
Accr14g00781 | 523 | ProSiteProfiles | Zinc finger RING-type profile. | 204 | 251 | IPR001841 | - | |
Accr14g00781 | 523 | SUPERFAMILY | RING/U-box | 355 | 419 | - | - | |
Accr14g00781 | 523 | SMART | ibrneu5 | 271 | 342 | IPR002867 | GO:0008270 | |
Accr14g00781 | 523 | SMART | ibrneu5 | 352 | 411 | IPR002867 | GO:0008270 | |
Accr14g00781 | 523 | ProSitePatterns | Zinc finger RING-type signature. | 221 | 230 | IPR017907 | - | |
Accr14g00781 | 523 | FunFam | RBR-type E3 ubiquitin transferase | 56 | 191 | - | - | |
Accr14g00781 | 523 | CDD | Rcat_RBR_unk | 368 | 404 | - | - | |
Accr14g00781 | 523 | SUPERFAMILY | Ribonuclease H-like | 71 | 173 | IPR012337 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr14g00781 | 30 | 402 | C3H Transcription Factor Family | AT2G19610 | 26.904 | 3.49e-31 | 123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr14g00781 | - | - | gmx:100783040 | 840.106 |