Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00778 ATGGACGGCAATGATGGAAATAGAGAACAGGTTGTTGATGTTCGGTCGGTGGTAGAAGCTGTTTCTGCAGAAGATGGAGATGTCCCTGTGTACCAGGTCGAAAGCTTGTGCATGCGCTGCGGTGAAAACGGGACGACAAAATTCTTGCTGACTTTAATTCCAAACTTCAGAAAGATTTTGTTGTCAGCTTTTGATTGTCCTCATTGTGGCGAGAGGAACAATGAAGTACAGTTTGCTGGAGAAATCCAACCACGTGGTTGCTGCTACAGTTTGGAGATCCCATCAGGCAATCAGAAGATGCTTGATCGACAAGTGGTAAAATCTGAATCTGCTACTATCAAGATACCAGAGTTGGATTTTGAGATTCCCCCTGAGGCTCAACGTGGAAGTCTGTCAACGGTGGAAGGTATACTAGTACGAGCTGCTGATGAACTTCAGGCCCTTCAGGATGAGCGCAAAAAAGTTGACCCACAGACGGCTGAAGCAGTTGACCTGTTCTTGATGAAATTGAGAGCTTGCACGGCTGGAGAGCTTTCATTCACATTTATTCTTGATGACCCTGCTGGAAACAGCTTCATTGAAAACCCGTATGCTCCATCATCTGATCCATCATTGAGTATCAAATTCTATGAGCGTACTCCTGAGCAGCAAGCATCATTAGGATATCTTGTTGACCTGTCACAAATTGAAAGGGCATCAGTAGTGGAAGAAGCTGGGGTTTCTGATCAAGGGAGGGTGGAACCACATGGGTCAATAGGGGCAGCTGCTGGTCATCGAGCCATTGCACAGACTAATAGTGCTGAAATTGCAGATTCCTTATTTAGATATTCTGCACCGGAAGAGGTGATGACCTTCCCATCAACTTGTGGTGCTTGTGCTACTAGGTGTGAGACTCGAATGTTCGTCACTAAAATTCCATATTTCCAGGAAGTTATTGTTATGGCGACTACCTGTGATGCTTGTGGTTACCGCAACTCTGAGTTAAAACCTGGTGGGCGAATTCCTGAAAAAGGAAAGAAGATTTCACTTTCTGTGAAAAATGTTCATGATTTAAGCCGTGATGTAATAAAGTCTGATACTGCTGGTGTAAAAGTTCCTGAACTTGACTTGGAGCTAGCAAGTGGCACTCTAGGAGGAATTGTTACGACTGTTGAAGGTCTAATCACAAAAATCAGTGAAAGCCTTGAGAGGGTGCATGGATTTACTTTTGGAGATAGTCTTGATGAAAACAGAAGAAGCAAATGGCTAGAGTTTAGAGAAAGGCTAAAAAAGCTTCTTAGCTTGGAAGAGCCTTGGACCTTAATTCTTGATGATGCATTATCCAATTCGTTCATAGCGCCAGCAACTGATGATCTAAAAGACGACAACCAATTAACATTTGAGGAATATGAGAGGTCATGGGAACAAAATGAAGCATTGGGTCTGAATGATATTGACACCTCTGCTGCTGATGTAGCTTATGAAGCAGCAAATGATGCCAAAACTGAGTGA 1491 0.4346 MDGNDGNREQVVDVRSVVEAVSAEDGDVPVYQVESLCMRCGENGTTKFLLTLIPNFRKILLSAFDCPHCGERNNEVQFAGEIQPRGCCYSLEIPSGNQKMLDRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILVRAADELQALQDERKKVDPQTAEAVDLFLMKLRACTAGELSFTFILDDPAGNSFIENPYAPSSDPSLSIKFYERTPEQQASLGYLVDLSQIERASVVEEAGVSDQGRVEPHGSIGAAAGHRAIAQTNSAEIADSLFRYSAPEEVMTFPSTCGACATRCETRMFVTKIPYFQEVIVMATTCDACGYRNSELKPGGRIPEKGKKISLSVKNVHDLSRDVIKSDTAGVKVPELDLELASGTLGGIVTTVEGLITKISESLERVHGFTFGDSLDENRRSKWLEFRERLKKLLSLEEPWTLILDDALSNSFIAPATDDLKDDNQLTFEEYERSWEQNEALGLNDIDTSAADVAYEAANDAKTE 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00778 496 Gene3D ZPR1, A/B domain 81 222 IPR042451 -
Accr14g00778 496 Gene3D ZPR1, A/B domain 333 475 IPR042451 -
Accr14g00778 496 FunFam Zinc finger protein ZPR1 333 475 - -
Accr14g00778 496 FunFam Zinc finger protein ZPR1 278 332 - -
Accr14g00778 496 Coils Coil 131 151 - -
Accr14g00778 496 FunFam zinc finger protein ZPR1 81 222 - -
Accr14g00778 496 FunFam Zinc finger protein ZPR1 25 80 - -
Accr14g00778 496 SMART zpr1 287 447 IPR004457 GO:0008270
Accr14g00778 496 SMART zpr1 35 195 IPR004457 GO:0008270
Accr14g00778 496 NCBIfam ZPR1 zinc finger domain 288 479 IPR004457 GO:0008270
Accr14g00778 496 NCBIfam ZPR1 zinc finger domain 37 219 IPR004457 GO:0008270
Accr14g00778 496 Gene3D ZPR1, zinc finger domain 277 332 IPR042452 -
Accr14g00778 496 Gene3D ZPR1, zinc finger domain 27 80 IPR042452 -
Accr14g00778 496 Pfam ZPR1 zinc-finger domain 287 445 IPR004457 GO:0008270
Accr14g00778 496 Pfam ZPR1 zinc-finger domain 35 194 IPR004457 GO:0008270
Accr14g00778 496 PANTHER ZINC FINGER PROTEIN ZPR1 14 489 IPR040141 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00778 5 494 C2H2 Transcription Factor Family AT5G22480 76.171 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00778 K06874 - pvy:116144733 818.15