Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00703 ATGGCTGATTCTCCCTCTCCTTCTCCCTCCTCCATCGCCACCACGACTACCGCCCTCCACCACCATCCCTCCGCCTTCGATCTCACCATCCTCCTCGCCGCCATTGTTTGCGCCTTCCTCTGCGCCCTCGGCCTCAACACCATGCTCCACTGCGTCTTCCAATGCGCCGTCATCGAGCCGATCCAATGGATCACCTCTCGCCGAATCAATTCCGGCCTCAAGAAGAAAGACATGGTGGCTCTTCCTACTTCCACTTTTTACGCACACCCCACTTCTTCTTCTTCTTCTACAGCAACTAATTGTGCGATTTGCTTGGCGGATTTCAGCGACGGAGATAGAATTAGGTTTCTGCCAAAGTGCAGTCACACATTTCATGTGGCTTGTATTGATAAGTGGTTGCTTTCTCATTCATCTTGCCCAACTTGCCGCCATTTTCTGAAATCCTCTGCTGATTCACTTGACACTCTGCATCTTGTTATACCTTAG 486 0.5123 MADSPSPSPSSIATTTTALHHHPSAFDLTILLAAIVCAFLCALGLNTMLHCVFQCAVIEPIQWITSRRINSGLKKKDMVALPTSTFYAHPTSSSSSTATNCAICLADFSDGDRIRFLPKCSHTFHVACIDKWLLSHSSCPTCRHFLKSSADSLDTLHLVIP 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00703 161 FunFam E3 ubiquitin-protein ligase ATL6 62 149 - -
Accr14g00703 161 SUPERFAMILY RING/U-box 100 149 - -
Accr14g00703 161 Pfam Ring finger domain 100 143 IPR001841 -
Accr14g00703 161 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Accr14g00703 161 CDD RING-H2_EL5-like 101 143 - -
Accr14g00703 161 PANTHER RING-H2 FINGER PROTEIN ATL78 17 148 IPR044602 GO:0016567|GO:0016740
Accr14g00703 161 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 148 IPR013083 -
Accr14g00703 161 SMART ring_2 101 142 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00703 1 146 C3H Transcription Factor Family AT1G20823 42.949 1.44e-34 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00703 - K19040 gmx:100779286 200.29