Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00687 ATGATGAATTTTTCAATTGGAGGTGGTGGTAAAGGCTCAAACAATCCCTACAGAAGAACGATTTACCACCGTCACACTCCCTTTCAGATCACAACACTTGAAGAATTTTTCAAGAAGTCCGCTCATCCGGATGAAAACCAACGGCGCCAATTGGGCAGAGAGCTGGGGCTGGATCCCAAACAAATCAAGTTTTGGTTTCAGAATAAGAGAACTCAAACAAAGACTCAACATGAGCGAGAAGACAATGAAATGCTTCGTGCTGAAAATGAAAGGATACAATGTGAGAATATAGCATTTAGAGAGGCACTGAAGCACAAGACTTGCCCCTCTTGTGGGGGTCCACCGAATGGCGAAGAAGAACTTGGCCTCCATGTCCAAAGGCTGCAACAAGAGAATGTTCAACTCAAAGAAGAGTATGAGAAAGTATCAAACATGCTTGCAAACTGCATTGGCAGACCAATACCAGAACTAGATTCTTCTGGGGATCATTCCTCGGCCGGATCTCCACCACTGCCACCAGTGGCTCTGTCACCGGGAAATTCCCCGAACCAAGACAGTACTGGGAGTCCAAGTCTTGACCTGGACTTAGGATCTGTCGTTACGGTCTCAGATGGAAACAAGTTGCCGTTGCTAATGGGAGAAATCACAGACGTGGAAAAGGATATGATGTTAGAGGCAGCTAAAAACGCCATGGATGAATTACTGAAGCTTATGCCTATTGATGAGCCCTTGTGGATCAAGACTTCGATTGGTAGTGGACAACTTGTTCTTCATCGTGAGAGCTATGAGAAGTTGTCTAATAGGGCTAATCACTTCAGAAGTTCCAGTGCTCGTCTAGAAGCATCAAAAGAATCGCGAGTGGTTTGGATGAATGCCATGAAATTGGTTGACATGTTCTTAGATCTGGACAAGTGGGTCAATTTGTTCCCCACAATTGTTAGAAAAGCTGAAATACTTGAAGTTCTTAATGTTGGAGCATCAGGAAATCGTTCTGGAGCTTTGCAACTGATGTATGAAGAGATGCACATTATATCACCAATGGTGGCAGCTCGAGAGTTCAGCTTCATTCGCTACTGTCAACAAGTAGAGACAGGTGTGTGGGCCATAGCTGACGTGTCATTCGATTCCTTGAGAGACAACATTCCTATCTCTCGAGCTTGGAAATTTCCTTCTGGTTGCCTCATTCATGACTTGTCCAATGGCTTCTCCAAGGTTACTTGGATTGAACATGTTGAAGTGGACGATAAAACCCAAACACACCGTACGTTTGGAGGTCTCATTTCGGAAAATCTTGCTTATGGAGCAGAAAGATGGGTGGCGACACTTCAAAGAATGTGCGAACGATTTGTATTTGCCTTGGATAAAAATACTCCACTCCAAGAAGCTCGAGAAGTGATAAGTTCTGGAGATGGAAGGAGAAGCGTAATGAAGCTTTCTAATCGAATGGTGAAGGACTTCTGTGAAGCTATGAACATGACAAATAAGGAGTTCCCTGATTTTTGCGAGGCGAGTAACAGTGGAGTTAGGGTTTCTGTGAGGAGAAATAGAAACAAAGAAAGAGGTCAACCTGAGGGGGTGGTTATTACTACTTCAACCTCATTCTGGCTTCCATTTGGGCATCAGACTGTGTTTGAGTTCTTGATGAATGACAAAAGGCGAGGTGAGTGGGATGTTCTATCTCGTGGGAACTTACGGATTCAGCAAATTGCTCGCATCTCCAATGGGTCCCATCCTAGCAACAGTATCAGAATTATCCAGCCTTTGATTCCCAGTAATGAGAGAAATATGACTATTCTTCAAGAGACTTTCACTGATAGCTTGGGATCTATGCTCGTATATGCTCCCGTCGACATGCGAATCATAAATATGAGTGTGAGAGGAATGGACACTTGCCTTATGCCGATCCTTCCGTCGGGCTTCGTCATCTCCAGCGACGGTCACTGGGGTCTCCGTCCCCGCCCATTATCATTCGCCGGAGATTCCTCTGGCAGCTCATGTGAATCGAGCTCAAATAATAACCACGGCGCCTCATTGTCAGCACCACCATCAGGAGGAAGCTTTGTAACTGTGACTTTCCAGATTCTGGCGTGCAGGAACGATGACGAGGCAGTCAGGAACCTTAATGTTGAAACTGTCTCGATCATCAACTCTATCCTCAGCTCCGCTGTTGATAACATTAAGGTGGCTTTCAACTGTGCAGGTCTCGATTAA 2211 0.4509 MMNFSIGGGGKGSNNPYRRTIYHRHTPFQITTLEEFFKKSAHPDENQRRQLGRELGLDPKQIKFWFQNKRTQTKTQHEREDNEMLRAENERIQCENIAFREALKHKTCPSCGGPPNGEEELGLHVQRLQQENVQLKEEYEKVSNMLANCIGRPIPELDSSGDHSSAGSPPLPPVALSPGNSPNQDSTGSPSLDLDLGSVVTVSDGNKLPLLMGEITDVEKDMMLEAAKNAMDELLKLMPIDEPLWIKTSIGSGQLVLHRESYEKLSNRANHFRSSSARLEASKESRVVWMNAMKLVDMFLDLDKWVNLFPTIVRKAEILEVLNVGASGNRSGALQLMYEEMHIISPMVAAREFSFIRYCQQVETGVWAIADVSFDSLRDNIPISRAWKFPSGCLIHDLSNGFSKVTWIEHVEVDDKTQTHRTFGGLISENLAYGAERWVATLQRMCERFVFALDKNTPLQEAREVISSGDGRRSVMKLSNRMVKDFCEAMNMTNKEFPDFCEASNSGVRVSVRRNRNKERGQPEGVVITTSTSFWLPFGHQTVFEFLMNDKRRGEWDVLSRGNLRIQQIARISNGSHPSNSIRIIQPLIPSNERNMTILQETFTDSLGSMLVYAPVDMRIINMSVRGMDTCLMPILPSGFVISSDGHWGLRPRPLSFAGDSSGSSCESSSNNNHGASLSAPPSGGSFVTVTFQILACRNDDEAVRNLNVETVSIINSILSSAVDNIKVAFNCAGLD 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00687 736 MobiDBLite consensus disorder prediction 153 196 - -
Accr14g00687 736 SMART HOX_1 18 80 IPR001356 GO:0003677
Accr14g00687 736 CDD START_ArGLABRA2_like 220 447 - -
Accr14g00687 736 Pfam Homeodomain 23 74 IPR001356 GO:0003677
Accr14g00687 736 SUPERFAMILY Homeodomain-like 12 79 IPR009057 -
Accr14g00687 736 SUPERFAMILY Bet v1-like 217 448 - -
Accr14g00687 736 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 19 731 IPR042160 -
Accr14g00687 736 MobiDBLite consensus disorder prediction 661 681 - -
Accr14g00687 736 Gene3D - 10 92 - -
Accr14g00687 736 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Accr14g00687 736 Gene3D - 224 421 IPR023393 -
Accr14g00687 736 FunFam Homeobox-leucine zipper protein HDG1 9 92 - -
Accr14g00687 736 SMART START_1 225 448 IPR002913 GO:0008289
Accr14g00687 736 Pfam START domain 227 448 IPR002913 GO:0008289
Accr14g00687 736 Coils Coil 118 145 - -
Accr14g00687 736 ProSiteProfiles START domain profile. 216 451 IPR002913 GO:0008289
Accr14g00687 736 Coils Coil 70 90 - -
Accr14g00687 736 CDD homeodomain 18 77 IPR001356 GO:0003677
Accr14g00687 736 SUPERFAMILY Bet v1-like 471 646 - -
Accr14g00687 736 MobiDBLite consensus disorder prediction 178 196 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00687 18 731 Homeobox Transcription Factor Family AT1G73360 42.486 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr14g00687 START 5.5e-36 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00687 K09338 - qsa:O6P43_014240 751.895