Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00669 ATGGGTCGTCGGAAGATCGAGATGAAGCTTGTGAGAGACTCAAGCTCGAGGCAAGTCACCTTCACCAAACGTCGCAATGGCGTCTTCAGGAAAGCGAACGAGCTCGCAACCTTGTGTGGAGCAGAAGTCGCCATCATCGCCTTCTCTCCCGGCGGAAAGCCTTTCTCCTATGGCCACCCAAGCGTCAACGCCATCACCAACAGGTTCCTCCGTCGTGGCTCCGTCGAGGACAATAATGGCGGATCAAAGGGTCGTCGTCGGGCAAGTAGTTATAATAATGGTGAAGCTGTTATTGAGAAGCTGAACCAGAAGCTTATGAATCTGATGAATGAGGCTGAGGTGGAGAAGAAGAAGGGAGAGATGCTTAACGAGAGGTTGAAGAAGATGAATTTGAAATTGAATAACGAGGGGAAGCTGCCATTGGAAGGTATGAATAAGGAAGAACTTGGGAAGTTGAAGAAGTTTCTGGAAGGAATGAGAGATGAAGTTGAAGAGGGTGTGAAGCAATTGGAGGCTTCGTCTTGCTTGATGCTTCTTGCTCATAAGGCTGTGGACAAGAAAGAGAATTGCAATGCTTCTGCAAATTAA 588 0.4796 MGRRKIEMKLVRDSSSRQVTFTKRRNGVFRKANELATLCGAEVAIIAFSPGGKPFSYGHPSVNAITNRFLRRGSVEDNNGGSKGRRRASSYNNGEAVIEKLNQKLMNLMNEAEVEKKKGEMLNERLKKMNLKLNNEGKLPLEGMNKEELGKLKKFLEGMRDEVEEGVKQLEASSCLMLLAHKAVDKKENCNASAN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00669 195 Coils Coil 153 173 - -
Accr14g00669 195 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Accr14g00669 195 SUPERFAMILY SRF-like 2 72 IPR036879 GO:0003677|GO:0046983
Accr14g00669 195 MobiDBLite consensus disorder prediction 73 93 - -
Accr14g00669 195 PANTHER MADS BOX PROTEIN 3 164 - -
Accr14g00669 195 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 12 57 IPR002100 GO:0003677|GO:0046983
Accr14g00669 195 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Accr14g00669 195 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Accr14g00669 195 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Accr14g00669 195 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Accr14g00669 195 Gene3D - 14 79 IPR036879 GO:0003677|GO:0046983
Accr14g00669 195 Coils Coil 91 129 - -
Accr14g00669 195 FunFam Agamous-like MADS-box protein AGL62 13 79 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00669 1 182 Type I MADS-box Gene Family AT2G34440 42.308 3.94e-44 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Accr14g00669 SRF-TF 1.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00669 - - pcin:129286044 245.358