Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00660 ATGAGACTCTCTTCAGCTGGTTTTACTCCTTCACCTCAGGAAGGAGAAAAGCGAGTTCTAGATTCTGAGCTTTGGCATGCTTGTGCTGGCCCCCTCGTTTCCCTTCCAGCTGTTGGAAGTCGCGTCGTCTACTTCCCCCAGGGTCACAGTGAACAGGTTGCTGCATCAACTAACAAGGAGGTGGATGTCCATGCCCCTAACTACCCAAGCTTACCTCCCCAACTTATATGTCAACTTCATAATGTGACTATGCATGCTGATGCAGAGACGGATGAAGTATACGCTCAGATGACCTTGCAACCTCTGAATCCTCAAGAACAAAAGGAGGCATACCTTCCAGCAGAGTTGGGCACTTCAAGTAAACAGCCAACAAACTACTTCTGCAAAACTTTGACTGCTAGTGACACAAGCACTCATGGGGGATTCTCTGTTCCTCGTCGGGCTGCTGAGAAAGTTTTTCCTCCATTGGATTTCTCTCAGCAGCCTCCTTGCCAAGAGTTAATTGCTCGGGACTTGCATGGTAACGAATGGAAATTCAGACATATCTTCCGGGGCCAGCCTAAACGACATCTACTTACAACCGGATGGAGTGTCTTTGTTAGTGCTAAAAGACTTGTTGCTGGCGATTCTGTGCTGTTTATTTGGAATGACAAGAATCAATTGCTTCTTGGTATTCGACATGCAAATCGACCACAAACAGTGATGCCGTCGTCAGTGCTCTCAAGCGATAGCATGCACTTGGGGCTTCTTGCTGCTGCTGCACATGCAGCTGCAACAAACAGCCGTTTCACCATTTTCTACAACCCACGTGCTAGCCCATCAGAATTTGTCATACCCCTAGCAAAGTATGTTAAAGCTGTGTATCATACCCGAGTTTCAGTTGGCATGCGCTTCCGGATGTTGTTTGAAACAGAGGAATCAAGTGTCCGGCGATACATGGGCACAATTACCAGCATTAGTGACCTGGATCCCGTGAGGTGGCCTAATTCACACTGGCGATCAGTTAAGGTTGGCTGGGATGAGTCCACAGCAGGAGATAGGCAACCAAGAGTTTCCTTGTGGGAAATTGAGCCGTTGACAACATTTCCGATGTATCCTTCCCCATTCCCTCTTAGGCTTAAACGACCATGGCCTCCTGGACTGCCTTCTTTCCACGGTATGAAGGATGATGATTTGGGCATGAATTCTCCACTGTTTTTGGATAGAGGGCTTCAGTCTCTTAATTATCCTGGAATTGGGGTTACTCCTTGGATGCAACCAAGGTTTGATCCGTCCTTTCTGAATTTGCAAACTGACGTGTACCAAGCCATGGCTGCTGCTGCGCTTCAGGATATAAGGACTATAGATCCTTCAAAACAGCACGCAGCGTCCCTGTTTCAATTTCAGCAACCACAGAACTTCCCCAACAGGAATGCTGCTTTAGTGCAGGCCCAGATGATGCAGCAGTCTCAACAGCAACAAGCTTTTCAAAATAATCAAGAGAATATGCATCCATCTCAATCTGAGGCTCTAAGTCAGACTCATCTTCAGCATCGTAACTCTTTCGTTAATCAGCAACTCCACCAGCAGCCACAACAGCAACATCAACATCAACATCCAACTTTTTCTGATCAGCAGATTTCAAATTCTGTCTCTACAATGTCTCAGTTTGTTTCAGCACCTCAACCTCAGTCCCCACGGACACAAGCTACTCCTTCATTGTGTCATCAGCAAAGTTTTTCTGATTCAAATGGGAACAGTGTAGCTACTGCAATGGTTTCTCCACTGCATAGTATTTTGAGTTCATTTCCCCAAGAAGAAGCTTCCCACCTTCTCAATATGCCTAGGATAAGCTCTTGGATACCTGTTCAACCTTCTTCTACTACGGCTACTTGGCCTTCCAAGCGTGTTGCTGTGGACCCTCGTCTTTCTTCTGGTGCTTCTCAATGTGATCTGCCTCATATAGATCAGTTAGGTCAGCGTCCGAATATGTTGTCTCAAAATGCAGTTACTTTGCCACCCTTTCCCGGAAGGGAGTGTTCAATTGACCAAGAAGGGAGCACTGATCCACAGAACCATCTTTTATTCGGTGTTAATATAGATCCCTCGTCTCTTTTAGTGCAGAATGGGATGTCGAGCCTTAAGGGAATTAGCAGCAATGTTGATTCTACAACAATACCTTTTCAATCTTCTAATTACCTGAACACTACAGGCGCTGAATCTACTTTGAATCCTGCAATGTCACAAGCCATTGGTGATTCAGGATTCTTGCAAGCCGCAGAAAATATGGGCCAAGGAAATTCTTCCAATGAAACCTTTGTAAAGGTTTACAAGTCAGGGTCCTTTGGAAGATCTTTGGATATCACTAAATTCAGCAGCTACCATGAGCTGCGCCGTGAGCTTGCTCGTATGTTTGGCCTTGAAGGCGAGTTAGAGGACCCTGTAAGATCAGGCTGGCAGCTTGTATTCGTTGACCGAGAGAACGACGTTCTCCTCCTTGGTGATGGCCCTTGGCCGGAATTTGTCAACAGTGTATGGTGCATCAAGATACTTTCCCCACAAGAAGTGCAACAAATGGGCAATAATGGTTTCGAGCTTCTGAATTCGGTTCCAATTCAAAGACTTTGTGAAGACTTTGTGAGCCGACAGGACCCTACAAGTTTAAGCTCTGGGATCACAACGGTGGGGTCTCTAGACTACTAA 2682 0.4616 MRLSSAGFTPSPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDVHAPNYPSLPPQLICQLHNVTMHADAETDEVYAQMTLQPLNPQEQKEAYLPAELGTSSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRHANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITSISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGMKDDDLGMNSPLFLDRGLQSLNYPGIGVTPWMQPRFDPSFLNLQTDVYQAMAAAALQDIRTIDPSKQHAASLFQFQQPQNFPNRNAALVQAQMMQQSQQQQAFQNNQENMHPSQSEALSQTHLQHRNSFVNQQLHQQPQQQHQHQHPTFSDQQISNSVSTMSQFVSAPQPQSPRTQATPSLCHQQSFSDSNGNSVATAMVSPLHSILSSFPQEEASHLLNMPRISSWIPVQPSSTTATWPSKRVAVDPRLSSGASQCDLPHIDQLGQRPNMLSQNAVTLPPFPGRECSIDQEGSTDPQNHLLFGVNIDPSSLLVQNGMSSLKGISSNVDSTTIPFQSSNYLNTTGAESTLNPAMSQAIGDSGFLQAAENMGQGNSSNETFVKVYKSGSFGRSLDITKFSSYHELRRELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNNGFELLNSVPIQRLCEDFVSRQDPTSLSSGITTVGSLDY 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00660 893 Pfam AUX/IAA family 754 849 IPR033389 -
Accr14g00660 893 Gene3D - 125 228 IPR015300 -
Accr14g00660 893 MobiDBLite consensus disorder prediction 518 575 - -
Accr14g00660 893 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 853 IPR044835 GO:0003677|GO:0006355|GO:0009725
Accr14g00660 893 FunFam Auxin response factor 291 363 - -
Accr14g00660 893 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Accr14g00660 893 FunFam Auxin response factor 125 229 - -
Accr14g00660 893 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Accr14g00660 893 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Accr14g00660 893 ProSiteProfiles PB1 domain profile. 764 848 IPR000270 GO:0005515
Accr14g00660 893 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Accr14g00660 893 SUPERFAMILY CAD & PB1 domains 757 839 - -
Accr14g00660 893 FunFam Auxin response factor 759 853 - -
Accr14g00660 893 CDD B3_DNA 126 219 IPR003340 GO:0003677
Accr14g00660 893 SMART B3_2 127 229 IPR003340 GO:0003677
Accr14g00660 893 Gene3D - 759 853 - -
Accr14g00660 893 MobiDBLite consensus disorder prediction 476 506 - -
Accr14g00660 893 Gene3D - 291 363 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00660 1 479 B3 DNA Binding Superfamily AT1G30330 86.983 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Accr14g00660 AUX_IAA 2e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00660 - - gmx:100798719 1471.45