Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00647 ATGGGAGAGCAAAAGCATAGTGTGCCAGCTCTGCAATGGATGCGTGACCCTGTTGATGTCACTCTATCTGAAGAATGCCCTCTCAAACATGTTCCTTGTCTTCACCCGAAGTTGAAGTTGGCATTGCAGAATATGGGCATCTCTAGTCTCTTTCCTGTGCAAGTTGCAGTTTGGGAAGAGACAGTTGGACCCGGTAATTTTGAGCGAGACCTTTGTATAAATTCTCCCACTGGAAGTGGAAAAACTTTAGCTTATGCTCTACCAATTGTGCAAATGCTGTCAAACCGTGTTGTAAAATGCTTGCGAGCTTTAGTGGTGGTGCCCACTCGTGATCTTGCCTTACAGGTCAAAGAAGTTTTTAATGCCATTGCGACTCCATTAGGTTTACATGTTGGCCTGGCTGTTGGTCAATCTTCAATAGCTGATGAGATTTCTAAGCTTGTGGATATACCAGGATATGAGGTAGGCATGTGTTACGATCCAGAGGATATATCTCTTAATTACCGACTTGGATTCCAAAGTAAGGTGGATATATTGGTAGCTACCCCTGGACGGCTCATGGACCATATCACCACTACTAAAGGGTTCACACTTGAGCATCTTTATTATCTTGTGGTTGATGAAACAGATCGGCTTCTCCGGGAGGCCTACCAATCCTGGTTACCTACTGTGCTGGAACAAACTCGATCTAAGGACAAGAATATTTATCCACCAGCTGGTTCGTTTCTTCTTAATTCATTTAGTGCATTAAGCACTAGAAGGAGATGTGGAGTTGAGAGGGGATTTAAAGATAAACCTTACCCCAGGTTGGCAAAGATGGTTCTATCTGCAACAATAACCCAAGACCCAGGAAAGCTTGTTCAACTGGATCTGCATCACCCAATATTCTTGAAAGCTGGGCAAATGCGTTATAGGCTTCCTGAGAATTTGGAATCACTTAAAGTGATCTGTGAAACAAAGGTCAAACCCTTGTATTTGGCTGCCCTTTTAAAAACATTGGGAGGAGAAAAATGCATTGTTTTTACCAAATCTGTGGAGTCAACACATCGTCTGTGCAAATTGCTGAACTATTTCAGTGATCTTCAAATTAAGATCAAGCAATATTCTAGTCTTCATCGTCAACGTGTAAGAAGTAAGACATTGAATGAATTTCGGAAAGGGGAGTTTCAAGTGCTTGTGTCTTCTGATGCAATGACTCGTGGAATGGATGTTGAAGGGGTGAGAAACGTTATTAATTATGACATGCCAAAACACATAAAGACTTATGTTCATCGAGCTGGTAGGACAGCAAGAGCTGGGCAGGCTGGACGTTGCTTCACACTGATGTCCAAAGATGAGGCTAGGCGTTTGAAGAAGTTGTTGCAGAAGGCTGATAACAATACTTGCAGTGATCACACACTGCCCTCCAGTTTGATCGAAGAACTTCATGCCACTTACCAATCAGCGCTGAAAAAATTTAAAGAGACAGTTTTGGAAGCCGGAAAGAAACGCAAGAGGAGTTCAGAGACTAGTCAAGCAAGTTTATGA 1527 0.4263 MGEQKHSVPALQWMRDPVDVTLSEECPLKHVPCLHPKLKLALQNMGISSLFPVQVAVWEETVGPGNFERDLCINSPTGSGKTLAYALPIVQMLSNRVVKCLRALVVVPTRDLALQVKEVFNAIATPLGLHVGLAVGQSSIADEISKLVDIPGYEVGMCYDPEDISLNYRLGFQSKVDILVATPGRLMDHITTTKGFTLEHLYYLVVDETDRLLREAYQSWLPTVLEQTRSKDKNIYPPAGSFLLNSFSALSTRRRCGVERGFKDKPYPRLAKMVLSATITQDPGKLVQLDLHHPIFLKAGQMRYRLPENLESLKVICETKVKPLYLAALLKTLGGEKCIVFTKSVESTHRLCKLLNYFSDLQIKIKQYSSLHRQRVRSKTLNEFRKGEFQVLVSSDAMTRGMDVEGVRNVINYDMPKHIKTYVHRAGRTARAGQAGRCFTLMSKDEARRLKKLLQKADNNTCSDHTLPSSLIEELHATYQSALKKFKETVLEAGKKRKRSSETSQASL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00647 508 Gene3D - 19 300 IPR027417 -
Accr14g00647 508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 455 IPR027417 -
Accr14g00647 508 CDD DEADc_DDX51 38 294 - -
Accr14g00647 508 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 62 297 IPR014001 -
Accr14g00647 508 PANTHER RNA HELICASE 34 482 - -
Accr14g00647 508 FunFam ATP-dependent RNA helicase DDX51 15 300 - -
Accr14g00647 508 Pfam DEAD/DEAH box helicase 52 285 IPR011545 GO:0003676|GO:0005524
Accr14g00647 508 SMART helicmild6 349 433 IPR001650 -
Accr14g00647 508 SMART ultradead3 46 316 IPR014001 -
Accr14g00647 508 CDD SF2_C_DEAD 315 441 - -
Accr14g00647 508 Pfam Helicase conserved C-terminal domain 322 433 IPR001650 -
Accr14g00647 508 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 325 475 IPR001650 -
Accr14g00647 508 Gene3D - 310 508 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00647 70 450 Eukaryotic Initiation Factors Gene Family AT3G13920 24.093 3.65e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00647 K14807 - qsa:O6P43_013012 749.199