Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00623 ATGAGTGCTGCAGAGGATGAAGGGCAGCAACAGAAGCTCACAATTTTCTATGATGGCAAGGTTTGCGTCTCTGATGTCACCCACCTTCAGGCGAGGTGGATAATGAAGGAAGCAAGCAAAGAAATGGCGGAGGAGGAGAAGAACATGATGAAGTTGAACAGATCATTGAGTCAATCTCAGAGGCAGATGTGTAGCCCTAACAACAACAATGCTTCATCACTTTCCATGAAGAGATCTCTCCAACGTTTCCTTCAGAAGCGCAAGGATCGTATCCTCCATTCTCCTCACCCTTACCATCATCCTTAA 306 0.4608 MSAAEDEGQQQKLTIFYDGKVCVSDVTHLQARWIMKEASKEMAEEEKNMMKLNRSLSQSQRQMCSPNNNNASSLSMKRSLQRFLQKRKDRILHSPHPYHHP 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00623 101 SMART tify_2 6 40 IPR010399 -
Accr14g00623 101 MobiDBLite consensus disorder prediction 55 75 - -
Accr14g00623 101 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 8 99 IPR040390 -
Accr14g00623 101 Coils Coil 35 62 - -
Accr14g00623 101 ProSiteProfiles Tify domain profile. 6 40 IPR010399 -
Accr14g00623 101 Pfam tify domain 8 38 IPR010399 -
Accr14g00623 101 Pfam Jas motif 77 98 IPR018467 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00623 9 99 Tify Gene Family AT1G30135 46.809 6.97e-17 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr14g00623 tify 2.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00623 - - gmx:100781356 80.1073