Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00565 ATGGAACTTTCTAGTGGGGAAGCAGAAATGCCAATCCCAATAAAGAGTACTATATATGGTGGGGAACATGGTAATGGCCATGGGCATGAGGGACATGGAAACATGGCCCATCATCATCATCTCCACCATGGCCATCAAGACCCTTCTAATGGCTCCTCCATTACACAAAAACAAGCCCTTCAAGATCATAATCAGGACCATGGACCCTACATGAAGAAGAAGAAAGAGGTAATAATAAGGTACAGAGAATGCCTTAAGAATCATGCAGCTTCCATGGGAGGTAATGTCCTTGATGGCTGTGGTGAGTTCATGCCTAGTGGAGAAGAAGGCACCATTGAGGCCTTGACCTGCTCAGCTTGCCACTGTCACAGAAATTTCCACAGAAAAGAAGTACAAGGTGATGACCCGCCTCCTCCTTCTTCTTATTACAAATTTGGAAGGAAATTATACTTTGGAGATCTTCATCAGAAGAGTGTCCTGGCAACAGCCCCAGAACAAGCTTTTGTGGGGTACCCAACAGGCAACATTCTGCCATCAAGAACTGTACCACCTCCACCACACCAGATGATCCTGCCGTTCAATGCAGTAGGGCCTACATCAGGGCCACTAGTTCCTTCGGAATCAGATGAGCAAGAAGATGTCGTCATCGGTGGCGGTGGCGGTGGAATAGTGATGAGTAGTGGTAGGCCAGCATCATCATCACAGATAGTGGTGAAGAAGAGGTTCAGGACAAAGTTCACACAGGAGCAGAAGGAGAAGATGCTGGATTTTGCAGAGAGAGTTGGGTGGAAGATTCAGAAGCAGGAAGAATCTGTTGTGCAACAGTTCTGTCAAGAGATTGGAATCAGAAGAAGAGTTCTCAAGGTTTGGATGCACAACAACAAACACAATCTAGCCAAGAAAATTAATAACCCTTCTCCACCACCCCCACCACCACCAACTGCTTTAGTTAGTTAA 957 0.4619 MELSSGEAEMPIPIKSTIYGGEHGNGHGHEGHGNMAHHHHLHHGHQDPSNGSSITQKQALQDHNQDHGPYMKKKKEVIIRYRECLKNHAASMGGNVLDGCGEFMPSGEEGTIEALTCSACHCHRNFHRKEVQGDDPPPPSSYYKFGRKLYFGDLHQKSVLATAPEQAFVGYPTGNILPSRTVPPPPHQMILPFNAVGPTSGPLVPSESDEQEDVVIGGGGGGIVMSSGRPASSSQIVVKKRFRTKFTQEQKEKMLDFAERVGWKIQKQEESVVQQFCQEIGIRRRVLKVWMHNNKHNLAKKINNPSPPPPPPPTALVS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00565 318 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 58 298 - -
Accr14g00565 318 MobiDBLite consensus disorder prediction 47 63 - -
Accr14g00565 318 MobiDBLite consensus disorder prediction 17 68 - -
Accr14g00565 318 SUPERFAMILY Homeodomain-like 226 300 IPR009057 -
Accr14g00565 318 MobiDBLite consensus disorder prediction 303 318 - -
Accr14g00565 318 Pfam ZF-HD protein dimerisation region 79 131 IPR006456 -
Accr14g00565 318 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 81 130 IPR006456 -
Accr14g00565 318 FunFam Zinc-finger homeodomain protein 2 227 300 - -
Accr14g00565 318 MobiDBLite consensus disorder prediction 298 318 - -
Accr14g00565 318 Gene3D - 226 300 - -
Accr14g00565 318 NCBIfam homeobox domain, ZF-HD class 239 295 IPR006455 -
Accr14g00565 318 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 80 131 IPR006456 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00565 71 306 ZF-HD Transcription Factor Family AT2G02540 53.469 1.75e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Accr14g00565 ZF-HD_dimer 2.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00565 - - qsa:O6P43_031434 311.227