Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00550 ATGGAAAGGATGGAAAGATCTCCTTGCTACCATGACAATGGCCTCAAGGAAGGACCATGGACTCCTGAGGGCCTCAATTATTTAAGGCCTGACATTGAAAGACACAATTTTTCTCAAGAAGAAGAGCAGGTCATACTGCATCTTCATTCCCTCGGAAAAAGTTGGTCAGCAATTGCACCCCATCTTCCGGGGAGGACTGATAAGGAGATCAAGAATTTCTGGAACACACATCTAAAGAAAAAGAAGAAGTTAATTCCACCGTTTGTAAAGACACTTGAAGATGAGATGAGAGAGGGATTACTGCTGCGCTTGACCCGTATAAGAGATTTTATCAGGCTTTTGTTGAGTTATCCAATGAGAACCGTGCATGATGGCGAACTCAAGGCTTGGATTCGCGAAGCTTCAAATAGGAGTCATTCTGTGGATGATTTGAATCGCCTTCTTCGTCAGAGGCCGCTTAAATGCTTCCAAGGCCTTTTACCAATGTACAAATTGGACGAGGTGGAAAAAGGTTTGAGTCCCTCATATGCTGATTCCAACGTGATACCAGAAGACATTCTCAGTTTATCTGCGAATCTTGCTGTGGATCAACTGATTCAAACTTTGATGTTTGAGGATGATCATGTACGCGGCATTCACCATGTCTTGCTCTCCACTAGAGATACAACTGAAAAAAGACTAGTTAAGGAAAAAATAGAATCAGCCTTGAAAGACCAGAAAATTTTGCTTCACCTTCATGAAACCTTCACCCAAGTCTTACTTATTGATGCCTCAAATTCCCAAGGTCTGCCTGAGGAGGTCCATGTTCAACGCCAGATAGCTCAACAACTTCTTATTCCAATGATAGAAGTCAATGAGAATTTGCTTTTAACGAGTAAAGAAAAAGAGATGTCCAAAAATAAATACTCGTACTTGGTGCTTTTGGTGGATGGAGAAGCCAATGAGCCTCTTGATCCTCGCAAAGTGGGTATTCCTGAAGAACTTGCAGGAGTTGTGGTGTGCATTACTTCGAAGCAGGATAATAGTGAATTAACAATGGCAATGGATCTGAACATCAGCACACAGGATCACTTGTTGCCATGGGAAGTTTTTTGTGCAAATATTGCGATTTTGCAATCAGAGTATACAAAGTCAATGTCCGCGTGTATAGTTCAAGAATGTGGTGGTCATCTACTTGCAGGAGTCATTGTAGCAAAATCTCTAAGGAATGCAAAACGTGAAGATTGGGAACTTGCTCTGTACAAATTGCGTTCGTTTCTTTCTTCCAATGACAGTGATATGTTTCAAGGCCAGAGCAGCGTCTTGCTTAAAGCATTCATAAACTTCATCTGGCATGATTTAAGTAAGACACAAAAGTATTGTCTTACATCATGTTTATTCATTCCTAAATTTGGGAAGCTTGAGAATGAGTTGATCAATGATTGGATTTCTTCTCGATTGGTGGTTGCTAGTGAAGCGGAGCATACTTTGAGAGAGCTACTTAACCGTTTTGCTTTATTGCAGTTAAAGGTCACCAAGTCAAGGTATATTCAAATTCCACAAGACACATATGCTGTCTTGCAATTATTAAACACTCAAAATCCTTTTTTCATGAAAAAATCTGAGTTAGGGTTGGTTGAAGCACCAGATAGTGAGCTATGGCATAGTGCTGTATATATTGATTTGGCAGACAATAAGCTACCCGAGTTACCTTTGTCTCCGGATTGTCATGAACTCAAAGCGTTGAAGTTGCACAACAATGATGAGTTGACGGAAATCCCACCCCTGTTCTTCTCTAAAATGCCTCTACTTTGCATCTTGGATCTGTCCTACACTAGTGTTAGTGAACTGCCAAACTCCTTTTTTAAGTTGGAGCAACTTAGAGAACTCTATATGAAATCTTGTGAATGCTTCATGGAACTGTCCTCAGACGTTGGAAAATTGCAGAATCTAGAGAAGATTGATCTTGACAAGACTCATATTATACATTTGCCAAAAGAGATCCAGGAGTTGACCAATCTCCAAAGTTTGACCCTTTGTTTGTTTGAGTATCGTAGCAGGAAAAGTAAAAAATATACGAGGTCAACAATTATTCCTTCTGGGGTGATTTCAAAACTTAAGGGCCTGAAACATTTAAGCATCGATGTAAACCCTGATGATGATCGATGGGAAAAAAATTTAGAGGTCATTTTACCAGAAGTCTTGGCATTGGATTGCCTACAAACAATTAGTTTGTACATTCCAGCACCTACACTTTTAAATCTCATACCTTCACACATTTTTGAGCTTGATTTTAGATTCATTGTTGGCAAACATATGTCACGGATCATTTCAGGTACGCTACCCACAGCTGAAGGAAAATTTAAACAAAGTGAGCGAAGCTTAAAGTTTGTGAAAGGTGTTGATGTCCCCGAAAGAGTAAGTTTGGCTATTTTATATAGCAAGGCTTTATTTTTAGATCGACATATGACTATCAAGGATCTCTCAGAATTTGGCATGGAAAATATAGAGCAATTACAGGTGTGTATATTGGCTGAATGTAAGGAGATGCAAACAATTGTTGATGGAAGATGCTCAAGTAGTTCGGATATACTTCCCCGTTTGCTAGTGTTGAATGTATCGTACATGAAGAATCTAAGAAGCATTTGTGAAGGAGAAGTTCATTCTAGTCACAGTTTTGGCATGTTGAAGACCTTAGCATTGCACAATTGTCCCGTGCTAACGACTGTTTTCACGTTGGATTTTGTGGGAAACCTCTCACTCTTGAAGGTGCTTGTAGTTAAAGATTGTCTAAAAGTAAGTGCTTTAATATCTTGTGGACCATCCACACTCAAAGCAGGTACCTTCCTCCCAAAATTAAGAACAATGACACTTGTCCATCTTCCTGAACTAGTCAGCATTTCCAATGAATTACACATGGGTCAATGTCCAAGTTTAGAAAACATAGGAATTTATGATTGCCCAAAACTTGAGAGGCTTTCAAAAGAGGAGCTGTCAAGTCAAAATTTGAAAGTCATCAAAGGAGATATCGAGTGGTGGGGGGCATTGACTTGGCGCAAAGCAGAATGGAGCAAAGAAGAATGGGGAATAGATGACCGACCATCTAATTTTGATACAATCTTTTCTCCAATTGATAAACTGGCTGACATCATGAGTCAATTGGTATTGGATGATGATGTTGATGAAAGTCCAGGTGAGATAGTGACTAGGGAGACATCCAATGGCAGGGGTGACAAGGATAGGAGAGCTGAGGGAAAGAGGAGCTCGAGGCACAAGAAAGAGGAAGAGGAAGAGGAAGCCGACGGCGATGAAGAAGAGACAGAGAGTGAAGTTGGCTCTGGAGAAGAACATGGCAGAAAGAGAAGGGTTATATCAAATACATACAAGAGGATGGGCCCCAAACACGGAAGCTCCTCGGCGGTGCCACCGTGTTGTCAGGCCGATGATTGCCGGACTGATCTGAGCGGCGCCAAACTGTATCATCAGCGGCACAAGGTCTGTGAGAAACACGCTAAAGCACCGGTCGTACTCATTTCAGGGAATGAACAACGATTTTGCCAGCAATGTAGCAGGTTTCATGACCTTTCAGAGTTTGACTTCTCAAAACGGAGTTGTAGAAGACGTTTGAGAGAGCATATTGGGAGAAGGCGAAAGCCGAAAGGTTTAATCTGA 3651 0.4098 MERMERSPCYHDNGLKEGPWTPEGLNYLRPDIERHNFSQEEEQVILHLHSLGKSWSAIAPHLPGRTDKEIKNFWNTHLKKKKKLIPPFVKTLEDEMREGLLLRLTRIRDFIRLLLSYPMRTVHDGELKAWIREASNRSHSVDDLNRLLRQRPLKCFQGLLPMYKLDEVEKGLSPSYADSNVIPEDILSLSANLAVDQLIQTLMFEDDHVRGIHHVLLSTRDTTEKRLVKEKIESALKDQKILLHLHETFTQVLLIDASNSQGLPEEVHVQRQIAQQLLIPMIEVNENLLLTSKEKEMSKNKYSYLVLLVDGEANEPLDPRKVGIPEELAGVVVCITSKQDNSELTMAMDLNISTQDHLLPWEVFCANIAILQSEYTKSMSACIVQECGGHLLAGVIVAKSLRNAKREDWELALYKLRSFLSSNDSDMFQGQSSVLLKAFINFIWHDLSKTQKYCLTSCLFIPKFGKLENELINDWISSRLVVASEAEHTLRELLNRFALLQLKVTKSRYIQIPQDTYAVLQLLNTQNPFFMKKSELGLVEAPDSELWHSAVYIDLADNKLPELPLSPDCHELKALKLHNNDELTEIPPLFFSKMPLLCILDLSYTSVSELPNSFFKLEQLRELYMKSCECFMELSSDVGKLQNLEKIDLDKTHIIHLPKEIQELTNLQSLTLCLFEYRSRKSKKYTRSTIIPSGVISKLKGLKHLSIDVNPDDDRWEKNLEVILPEVLALDCLQTISLYIPAPTLLNLIPSHIFELDFRFIVGKHMSRIISGTLPTAEGKFKQSERSLKFVKGVDVPERVSLAILYSKALFLDRHMTIKDLSEFGMENIEQLQVCILAECKEMQTIVDGRCSSSSDILPRLLVLNVSYMKNLRSICEGEVHSSHSFGMLKTLALHNCPVLTTVFTLDFVGNLSLLKVLVVKDCLKVSALISCGPSTLKAGTFLPKLRTMTLVHLPELVSISNELHMGQCPSLENIGIYDCPKLERLSKEELSSQNLKVIKGDIEWWGALTWRKAEWSKEEWGIDDRPSNFDTIFSPIDKLADIMSQLVLDDDVDESPGEIVTRETSNGRGDKDRRAEGKRSSRHKKEEEEEEADGDEEETESEVGSGEEHGRKRRVISNTYKRMGPKHGSSSAVPPCCQADDCRTDLSGAKLYHQRHKVCEKHAKAPVVLISGNEQRFCQQCSRFHDLSEFDFSKRSCRRRLREHIGRRRKPKGLI 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00550 1216 Coils Coil 483 503 - -
Accr14g00550 1216 ProSiteProfiles Myb-like domain profile. 29 78 IPR001005 -
Accr14g00550 1216 MobiDBLite consensus disorder prediction 1065 1090 - -
Accr14g00550 1216 Coils Coil 1079 1099 - -
Accr14g00550 1216 SMART sant 33 80 IPR001005 -
Accr14g00550 1216 MobiDBLite consensus disorder prediction 1054 1116 - -
Accr14g00550 1216 SUPERFAMILY Homeodomain-like 25 84 IPR009057 -
Accr14g00550 1216 Gene3D - 1129 1199 IPR036893 GO:0003677|GO:0005634
Accr14g00550 1216 Pfam Myb-like DNA-binding domain 36 78 IPR001005 -
Accr14g00550 1216 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 82 IPR017930 -
Accr14g00550 1216 Gene3D - 36 81 - -
Accr14g00550 1216 Pfam Leucine rich repeat 571 628 IPR001611 GO:0005515
Accr14g00550 1216 Gene3D Ribonuclease Inhibitor 530 767 IPR032675 -
Accr14g00550 1216 SUPERFAMILY SBT domain 1136 1213 IPR036893 GO:0003677|GO:0005634
Accr14g00550 1216 CDD SANT 36 77 IPR001005 -
Accr14g00550 1216 Gene3D Ribonuclease Inhibitor 808 1001 IPR032675 -
Accr14g00550 1216 Gene3D - 360 431 IPR042197 -
Accr14g00550 1216 ProSiteProfiles Zinc finger SBP-type profile. 1135 1212 IPR004333 GO:0003677
Accr14g00550 1216 Pfam SBP domain 1138 1211 IPR004333 GO:0003677
Accr14g00550 1216 SUPERFAMILY L domain-like 540 991 - -
Accr14g00550 1216 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 1080 1213 IPR044817 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00550 1138 1214 SBP-box Gene Family AT1G53160 68.831 2.76e-31 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Accr14g00550 SBP 4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00550 - - pcin:129285668 1257.66