Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00549 ATGGGAAGGAAAAAGTCAGAGGAAGCTGGCCCTGCTGCAAAGGCTAAGAAGGAAAAGTTCTCTGTCTCTGCCATGCTTGCAAGTATGGATGAAAAACCTGATAAACCCAAAAAAGTATCTTCTTCATCAAGTAAGCCCAAGGCAAAATCTGCTCCAAGAGTTTCTGCATATACTGATGGTATTGATCTTCCTCCCTCTGATGAAGACGAAGAAGTCATGGAAGAGGAGCAAGAACAAAAGCAGTCCACTCTGCAGCAAAAGCCTGACTTAAAGCCTCTTGATGTGGCTATCAGTGACAAAGAGTTAAAAAAGCGGGAAAAGAAGGATCTTCTTGCTGCCCATACTGCAGAGCTGGCTAAGCAGGAAGCACTTAAGGATGACCGTGATGCTTTCACTGTGGTCATCGGAAGCCGGACTTCAGTGCTTGATGGAGAAAATGATGCTGATGCCAACGTGAAAGATGTGACAATAGAAAACTTTTCTGTGTCAGCACGGGGTAAAGAACTCCTTAAGAATGCATCAGTGAAGATATCTCATGGTAAGAGGTATGGTTTGGTGGGGCCCAATGGGAAGGGCAAGTCCACACTATTGAAGCTCCTTGCCTGGAGGAAGATACCAGTGCCGAAGAATATTGATGTGCTTCTGGTTGAACAGGAGGTAGTAGCTGATGATAAAACAGCAATTGAAGCTGTTGTTTCAGCTAATGAAGAACTTGTTAAAACCCGACAAGAAGTGGCTCTTCTTCAAAATGCAAGTTCTCTTGAAGAAAGTGGAGACAAGGATGATGGTTATGAAGATGATGCAGGTGAGAAGCTTGCTGAGCTGTATGACAAGTTACAGCTCATGGGATCTGACGCAGCTGAAGCTCAAGCATCAAAGATTCTAGCAGGATTAGGTTTTACAAAGGATATGCAGGGCCGTGCTACAAAATCATTTAGTGGGGGTTGGAGGATGAGAATTTCTCTAGCGAGAGCACTTTTTCTTCAGCCAACTCTATTATTGCTTGATGAACCAACAAATCATCTTGATCTGAGAGCTGTTCTATGGTTGGAGGAGTACTTGTGCCGTTGGAAGAAGACTTTGGTGGTTGTCTCACATGATAGGGATTTCCTAAATACAGTTTGCAATGAAATTATTCATCTGCATGATATGAAGCTTCATATCTACCGTGGAAATTTTGATGATTTTGAAACTGGTTATGAGCAGCGTCGCAAAGAGATGAATAAGAAGTTTGAGATTTATGATAAGCAGATGAAAGCAGCCAAAAGAAGTGGAAATCGGGTTCAGCAGGAAAAGGTCAAGGATCGAGCTAAGTTTGCTGCTTCTAAGGAAGCAGCAAAAAGCAAGGGCAAGGGCAAGGGCAAGGTTGATGAGGATGAAGCCCCAGCAGAGGTTCCACAAAAGTGGAGAGATTACAGTGTTGAGTTTCACTTCCCTGAACCGACTGAACTAACACCTCCTCTGCTGCAGCTTATTGAAGTGAGCTTCAGCTATCCAAATCGGCCGGATTTCAGACTCTCAAATGTTGATGTTGGCATTGATATGGGGACCCGTGTGGCTATTGTTGGGCCTAACGGAGCTGGGAAATCGACACTGCTGAATCTTCTTGCTGGTGACTTGACTCCAACTGAGGGTGAAGTTCGAAGAAGTCAGAAATTGAGGATTGGAAGATATTCCCAGCACTTTGTGGACCTTCTAACCATGGATGAAACACCTGTTCAGTATCTTCTTCGTCTCCATCCAGATCAGGAAGGACTCAGTAAGCAAGAAGCTGTCCGAGCGAAACTAGGTAAGTTTGGATTGCCTAGCCATAATCATCTTACCCCTATTGTCAAGCTATCGGGAGGGCAGAAAGCTCGGGTGGTGTTCACATCAATATCCATGTCAAACCCCCACATTTTGCTTTTGGATGAACCAACTAATCATCTGGATATGCAAAGTATTGACGCGTTAGCTGATGCATTGGATGAATTCACTGGTGGAGTTGTTCTTGTTAGTCATGATTCTAGATTGATATCACGTGTATGTGAGGATGAAGAGAGGAGTCAAATATGGGTAGTTGAGGATGGTACCGTCAAATTCTTTGATGGAACTTTTGAGGATTACAAGGACGAGCTGCTCAAAGAAATTAAAGCTGAAGTTGACGATTGA 2151 0.4379 MGRKKSEEAGPAAKAKKEKFSVSAMLASMDEKPDKPKKVSSSSSKPKAKSAPRVSAYTDGIDLPPSDEDEEVMEEEQEQKQSTLQQKPDLKPLDVAISDKELKKREKKDLLAAHTAELAKQEALKDDRDAFTVVIGSRTSVLDGENDADANVKDVTIENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVADDKTAIEAVVSANEELVKTRQEVALLQNASSLEESGDKDDGYEDDAGEKLAELYDKLQLMGSDAAEAQASKILAGLGFTKDMQGRATKSFSGGWRMRISLARALFLQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDMKLHIYRGNFDDFETGYEQRRKEMNKKFEIYDKQMKAAKRSGNRVQQEKVKDRAKFAASKEAAKSKGKGKGKVDEDEAPAEVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNRPDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLTPTEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIVKLSGGQKARVVFTSISMSNPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEERSQIWVVEDGTVKFFDGTFEDYKDELLKEIKAEVDD 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00549 716 MobiDBLite consensus disorder prediction 1 15 - -
Accr14g00549 716 Pfam ABC transporter 506 641 IPR003439 GO:0005524
Accr14g00549 716 Gene3D - 152 439 IPR027417 -
Accr14g00549 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 468 704 IPR027417 -
Accr14g00549 716 Coils Coil 231 251 - -
Accr14g00549 716 CDD ABCF_EF-3 489 691 - -
Accr14g00549 716 SMART AAA_5 179 394 IPR003593 GO:0016887
Accr14g00549 716 SMART AAA_5 515 691 IPR003593 GO:0016887
Accr14g00549 716 MobiDBLite consensus disorder prediction 1 90 - -
Accr14g00549 716 Gene3D - 454 715 IPR027417 -
Accr14g00549 716 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 155 415 IPR003439 GO:0005524
Accr14g00549 716 MobiDBLite consensus disorder prediction 439 464 - -
Accr14g00549 716 FunFam ABC transporter F family member 4 153 436 - -
Accr14g00549 716 FunFam ABC transporter F family member 4 454 716 - -
Accr14g00549 716 ProSitePatterns ABC transporters family signature. 312 326 IPR017871 GO:0005524|GO:0016887
Accr14g00549 716 Coils Coil 66 86 - -
Accr14g00549 716 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 489 714 IPR003439 GO:0005524
Accr14g00549 716 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 127 710 - -
Accr14g00549 716 Pfam ABC transporter 170 340 IPR003439 GO:0005524
Accr14g00549 716 Coils Coil 404 424 - -
Accr14g00549 716 CDD ABCF_EF-3 155 383 - -
Accr14g00549 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 400 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00549 489 692 Calmodulin-binding Proteins AT2G36910 28.251 4.25e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00549 K06184 - gmx:100806865 1149.81