Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00547 ATGGGTTGCTTATGCTCTAGAGGGATACATTCACACGATTATGTCGGCGAGAACCATGTCCAGAAAACGAAGAAATCCTCAAAGGGTATGTCAAGGAGAGATCAAAGACATGCAATGCAAGAGGAATGTAGTGGATCAAACGATGTAAATACAAGGTTGATATCATCAGATGAGAGTGAGAATAATGTAGGGACAACAGGGAAACCTGGGAGTTCGGAAAGTAGAAGTATCGAAGAAGGACCAAGTAGGATGATGATGTTGAATAGGATAGGTAGTTTAAGAGGAGAGGGAGGAGCCCAAGTTCTTGCAGGGTGGCCTTCATGGCTATCTGCTGTTGCAGGAGAAGCCATTAGTGGTTGGATTCCACGTAGATCAGAATCCTTTGAGAAGTTAGAGAAGATTGGACAAGGGACATATAGCCGTGTTTACAAAGCTAGAGATTTAGAGACAAATAAAGTAGTTGCATTAAAGAAGGTTCGATTTGCAAATATGGACCCAGAAAGTGTCCGTTTCATGGCTAGAGAAATCATTATATTACGAAGGCTTGATCATCCAAATGTCATGAAGCTTGAAGGCATGATAACCTCAAGAGTTTCTGGCAGCTTGTACCTTATTTTTGAATATATGGAACATGACCTCACTGGCCTCGCAGCTCTTCCTGGCGTCAAGTTTTCTGAAGAACAGATAAAGTGCTACATGCAGCAGCTATTGAGAGGATTAGAGCATTGTCACAAGAAGGGGGTGCTACATAGAGACATAAAAGGAGCAAATTTGCTAATAGACTATAAGGGCAATTTGAAAATTGCAGATTTTGGGCTAGCCACTGTTGTGGATGGCCAATCATTGACTAGTAGAGTTGTAACCTTATGGTACAGATCACCTGAACTTTTACTTGGAGCCACCGATTATGGCGAAGGCATTGACTTGTGGAGTGCTGGTTGCATTCTTGCAGAACTCTTCGCCGGCGAGCCTATCATGGCTGGTCGAACCGAGGTGGAGCAACTGCATAAGATATTTAAACTGTGTGGATCCCCTTCTGAGAGATACTGGAAGAAGTCGAAGCTACCACATGCCACCATTTTCAAACCTCAACACCCTTACAAGCGAGTTGTTGCAGAGACATTCAAGGATTTCCCACCCTCTGCCCTCAAACTTCTCGATGTGCTTCTTGCTATAGAACCTGCCGATCGAGGAACTGCTTCCTCAGCACTTCAGAGCGAGTTCTTCAAGACAAAGCCGCTTCCTTGTGAACCATCAAGCATGCCGAGGTATCCACCAAGTAAGGAGTTTAATATGAAGCTTCGAGAAGACGAAGCCAGAAGAAAAAGAGGGGCAACGAGGAAAGAAAATGAACCAGAACCCTGCAAGAGTTCTGTAAACCTTGAAGCTGTCCCATCACCTGATAGTGCCAAGTCCCACCTTTCAGCAGCCGTAGAGAATCGAGTAGAGCCAAAGGCACGGCGGAGACGGGAGAAGAACGGGCTGCTGTTAGAACCGGCAAGCACAAGAGGACCAAAAGTACGGTGTCGTTCAGGCCAATCCACGGTGCAGAGTGCTTACCTGAGCTTCATCCAGCATGAAGCTGCAGGAGAACGTGAGGTGTTTGTTGGAACTAGGAGAAAGCAAAGAGCCTATTGGAATGCCGCCAACGCCGCCCGTCTCTCCAAGTTCTCTAACTCCGTCGCCGCCGAAGGCGGCTCCCGGCTCCAGGTGATCACCAACGGACGAAACTCCTCCGTCGCGTGGGGAGACGACAGCTTTGACCAGAGGTATAGTCACACGTCCGCAGGAGAATCTGACCTCTTCCTGCCTGCATCCAACAAACCTCTTACCAAGGAATGTGGAGGGAAGATGCAATATTTAGGACCGTTGGAATCAGCAACGGAGAACCTAGAAGAATTGCTGAAGCAACACGAACAACAACTTCAACAAGTCTTGCGTAAAGGTGCTTTGGATCATAAGTTCACGACTTAA 1974 0.4671 MGCLCSRGIHSHDYVGENHVQKTKKSSKGMSRRDQRHAMQEECSGSNDVNTRLISSDESENNVGTTGKPGSSESRSIEEGPSRMMMLNRIGSLRGEGGAQVLAGWPSWLSAVAGEAISGWIPRRSESFEKLEKIGQGTYSRVYKARDLETNKVVALKKVRFANMDPESVRFMAREIIILRRLDHPNVMKLEGMITSRVSGSLYLIFEYMEHDLTGLAALPGVKFSEEQIKCYMQQLLRGLEHCHKKGVLHRDIKGANLLIDYKGNLKIADFGLATVVDGQSLTSRVVTLWYRSPELLLGATDYGEGIDLWSAGCILAELFAGEPIMAGRTEVEQLHKIFKLCGSPSERYWKKSKLPHATIFKPQHPYKRVVAETFKDFPPSALKLLDVLLAIEPADRGTASSALQSEFFKTKPLPCEPSSMPRYPPSKEFNMKLREDEARRKRGATRKENEPEPCKSSVNLEAVPSPDSAKSHLSAAVENRVEPKARRRREKNGLLLEPASTRGPKVRCRSGQSTVQSAYLSFIQHEAAGEREVFVGTRRKQRAYWNAANAARLSKFSNSVAAEGGSRLQVITNGRNSSVAWGDDSFDQRYSHTSAGESDLFLPASNKPLTKECGGKMQYLGPLESATENLEELLKQHEQQLQQVLRKGALDHKFTT 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00547 657 FunFam probable serine/threonine-protein kinase At1g54610 211 449 - -
Accr14g00547 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Accr14g00547 657 MobiDBLite consensus disorder prediction 16 41 - -
Accr14g00547 657 Gene3D Phosphorylase Kinase; domain 1 123 215 - -
Accr14g00547 657 SMART serkin_6 128 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr14g00547 657 SUPERFAMILY Protein kinase-like (PK-like) 123 416 IPR011009 -
Accr14g00547 657 CDD STKc_CDK9_like 128 409 - -
Accr14g00547 657 Coils Coil 624 648 - -
Accr14g00547 657 MobiDBLite consensus disorder prediction 16 82 - -
Accr14g00547 657 ProSitePatterns Protein kinases ATP-binding region signature. 134 157 IPR017441 GO:0005524
Accr14g00547 657 Pfam Protein kinase domain 128 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr14g00547 657 MobiDBLite consensus disorder prediction 439 455 - -
Accr14g00547 657 MobiDBLite consensus disorder prediction 439 490 - -
Accr14g00547 657 MobiDBLite consensus disorder prediction 42 78 - -
Accr14g00547 657 ProSiteProfiles Protein kinase domain profile. 128 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr14g00547 657 Gene3D Transferase(Phosphotransferase) domain 1 216 448 - -
Accr14g00547 657 FunFam probable serine/threonine-protein kinase At1g54610 115 210 - -
Accr14g00547 657 PANTHER CELL DIVISION PROTEIN KINASE 126 415 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00547 120 449 Core Cell Cycle Gene Families AT5G10270 50.427 1.60e-113 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Accr14g00547 Pkinase 5.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00547 - - qsa:O6P43_031464 701.434