Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00539 ATGGCTCTGATCCTATACCCTGGGAGGAACACCAACAAAAATGGTTTTAAGGCACTTATTGCAGCAGAGTATGTGGGTGTCCAAGTTAAGGTGGTCGAAGATTTTGAGATGGGTGTCTCAAATAAAACTCCTGAGTTTCTGAAGATGAACCCTATTGGCAAGGTTCCTGTTTTGGAAACACCAGATGGGCCAATATTTGAGAGCAATGCGATTGCACGCTATGTTGCTCGCTTGAAGGCTGACAGTCCATTATTCGGATGCTCCTCTATTGATCATGCCCACATTGAACAATGGATCGATTTTTCTTCATTGGAGATCGATGCTAATCTTATGGCTTGGATCAGACTAAGAGTGGGATATGTTCCATACCTTCCCCCGGCTGAGGAGGCTGCAATTTCTGCATTGAAGAGAGCATTGGGTGCTTTGAACACTCACCTTGCGTCTAATACTTTCCTTGTTGGGCATTCTGTGACCTTGGCTGATATCATCATGACATGCAATTTGTATTTTGGTTTCAATCGTCTCATGACTAAGAGCTTCACCTCAGAGTTTCCCCATGTTGAGAGATACTTCTGGACCTTGGTTAACCAGCCAAAATTCCAAAAAATTATAGGTGAGGTCAAGCAAACTGAAGCTGTCCCTCCTATTCAGTCTACAAAGAAGCCTTCTGAGCCCAAAGAATCGGCTAAACCCAAGCCAAAGAATGAGCCAAAGAAAGAGCCTAAGAAAGAGATAGAAAAGTCTGCAGAAGAAGCTGAAGGGGAGGCACCAAAGCCCAAACCCAAGAATCCACTTGACCTCCTTCCTCCAAGTAAGATGATATTGGATGAGTGGAAAAGACTCTACTCAAACACTAAAACCAACTTCCGTGAGGTTGCAATCAAAGGATTTTGGGACATGTATGATCCTGAGGGGTACTCTCTTTGGTTCTGTGATTACAAATACAATGATGAGAATACTGTTTCCTTTGTGACCATGAACAAAGTCGGTGGATTTCTTCAGAGGATGGACCTTGCTCGCAAGTATGCATTCGGGAAAATGCTTGTGATTGGTTCAGAACCACCATTCAAGGTGAAGGGATTATGGCTGTTCCGTGGGCAAGAAATCCCTCAATTTGTGATTGATGAGTGCTACGACATGGAGCTCTATGAGTGGACTAAGGTTGACATATCAGATGAAGCTCAAAAGGAGCGTGTGAATCAGATGATTGAAGATTGTGAGCCTTTTGAGGGACAGCCTCTTCTGGATGCCAAATGCTTCAAGTGA 1266 0.4384 MALILYPGRNTNKNGFKALIAAEYVGVQVKVVEDFEMGVSNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADSPLFGCSSIDHAHIEQWIDFSSLEIDANLMAWIRLRVGYVPYLPPAEEAAISALKRALGALNTHLASNTFLVGHSVTLADIIMTCNLYFGFNRLMTKSFTSEFPHVERYFWTLVNQPKFQKIIGEVKQTEAVPPIQSTKKPSEPKESAKPKPKNEPKKEPKKEIEKSAEEAEGEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKVDISDEAQKERVNQMIEDCEPFEGQPLLDAKCFK 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00539 421 Pfam Glutathione S-transferase, C-terminal domain 112 198 IPR004046 -
Accr14g00539 421 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 261 421 IPR036433 GO:0003746|GO:0006414
Accr14g00539 421 SUPERFAMILY Thioredoxin-like 8 85 IPR036249 -
Accr14g00539 421 SMART EF1G_2 260 368 IPR001662 GO:0003746|GO:0006414
Accr14g00539 421 MobiDBLite consensus disorder prediction 223 260 - -
Accr14g00539 421 Pfam Elongation factor 1 gamma, conserved domain 260 368 IPR001662 GO:0003746|GO:0006414
Accr14g00539 421 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Accr14g00539 421 FunFam Elongation factor 1B gamma 1 75 - -
Accr14g00539 421 MobiDBLite consensus disorder prediction 211 268 - -
Accr14g00539 421 Pfam Glutathione S-transferase, N-terminal domain 1 77 IPR004045 -
Accr14g00539 421 SUPERFAMILY GST C-terminal domain-like 74 215 IPR036282 -
Accr14g00539 421 CDD GST_N_EF1Bgamma 5 78 - -
Accr14g00539 421 CDD GST_C_EF1Bgamma_like 91 211 - -
Accr14g00539 421 SFLD Main (cytGST) 13 191 - -
Accr14g00539 421 Gene3D - 82 215 - -
Accr14g00539 421 FunFam Elongation factor 1 gamma 81 217 - -
Accr14g00539 421 Gene3D Glutaredoxin 2 75 - -
Accr14g00539 421 FunFam Elongation factor 1-gamma 1 261 421 - -
Accr14g00539 421 SFLD Glutathione Transferase (cytosolic) 13 191 IPR040079 -
Accr14g00539 421 SUPERFAMILY eEF1-gamma domain 261 421 IPR036433 GO:0003746|GO:0006414
Accr14g00539 421 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 421 IPR044628 GO:0004364
Accr14g00539 421 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 261 421 IPR001662 GO:0003746|GO:0006414
Accr14g00539 421 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00539 1 421 Eukaryotic Initiation Factors Gene Family AT1G57720 72.684 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00539 K03233 - jre:108988927 677.552