Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00502 ATGGAGACACAGTACAGTCACTCTCTCTTCGACCGGCACCCCATCATGAAGTCTAAAACTCCCGCAGTTAAATGGGTTAAAGAATGGGTTCCTCAAGATGTTGTGGCCACGGGTGGGAAGTGCAGGCTTTTCAGATGGGTAAGAGAGGATTCCTTAAAGTCCTTAAAGGACAAGGAAAAAGAACCATCTGTGCCTGAGCCAGAACCTGAGCCAACGACTGAAGTACTTTTTCTCTGTAGCTATGAAGGCTGTGGGAAAACTTTTATAGATGCTGGTGCTTTGAGAAAACATTCTCATATTCATGGAGAAAGGCAATTTGTTTGTACTTATGAGGGCTGTGGAAAGAAATTTCTGGATAGTTCAAAGCTGAAAAGACATAATCTCATCCATACCGGGGAAAGGGCTTATGTGTGTCCCATTGAAGGCTGTGGCAAGGCCTTCTCCCTCGATTTCAACCTAAAGTCTCACATGAAAACACATTCACAAGAGAACTACCATGTCTGCAAATACCCAGACTGTGGAAAGAGATACGCTCATGAATACAAGCTTAAGAATCACATTGTGGCACACCATGAAAAGAATGGATCAGGGGACCTGTATGGGACGAAGTATAATACTCCGCCTTCAGAGAAGCCAACAAAAGCTACAAAACCTTCTGGGAGTGCTTATGCTTCTGCATCGTCTGATCGTCCTTTTGTTTGTCCTTATGAAGGCTGTGAAAAGGCCTATATCCATGAATATAAACTTAAACTCCATTTGAAGAGAGAGCATCCTGGGCATGGTGATGAAAATGTTGCCGAGAATGCTCAGGCTAATAATAACAATGCTGACAATGAAATGGATGAAGCAAGCGACGCAGACGCCTATGGTGGGAAGAGATCAAATGGCAGAATTCAGAAGCCGAGTAAGCCCAAACCAAACTTGAAGTCGCCTCCATCGAAAATGGCCCGGCGCAAAGCAACGGCAACACCCTCTTCTGTGACCACTATGAAGGTGATCAACAAGAAGCCTTGGCCAGTGAAAGAAGAAAACTATGAGGAAGAAGACAGTGAAGAAACAGAGGAGGATCGGGACAACGTTGAAGATGGTTGGAGATATGGAGGAAACAATGAAGATGATGATGAAGAAACAGAATATGAAGACTGA 1146 0.4415 METQYSHSLFDRHPIMKSKTPAVKWVKEWVPQDVVATGGKCRLFRWVREDSLKSLKDKEKEPSVPEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQFVCTYEGCGKKFLDSSKLKRHNLIHTGERAYVCPIEGCGKAFSLDFNLKSHMKTHSQENYHVCKYPDCGKRYAHEYKLKNHIVAHHEKNGSGDLYGTKYNTPPSEKPTKATKPSGSAYASASSDRPFVCPYEGCEKAYIHEYKLKLHLKREHPGHGDENVAENAQANNNNADNEMDEASDADAYGGKRSNGRIQKPSKPKPNLKSPPSKMARRKATATPSSVTTMKVINKKPWPVKEENYEEEDSEETEEDRDNVEDGWRYGGNNEDDDEETEYED 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00502 381 Coils Coil 266 286 - -
Accr14g00502 381 FunFam zinc finger transcription factor YY1 163 194 - -
Accr14g00502 381 MobiDBLite consensus disorder prediction 199 226 - -
Accr14g00502 381 Pfam Zinc finger, C2H2 type 136 160 IPR013087 -
Accr14g00502 381 FunFam zinc finger transcription factor YY1 77 102 - -
Accr14g00502 381 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 106 IPR013087 -
Accr14g00502 381 FunFam Putative zinc finger protein 143 103 133 - -
Accr14g00502 381 Gene3D Classic Zinc Finger 135 164 - -
Accr14g00502 381 Gene3D Classic Zinc Finger 103 134 - -
Accr14g00502 381 Gene3D Classic Zinc Finger 165 195 - -
Accr14g00502 381 MobiDBLite consensus disorder prediction 344 358 - -
Accr14g00502 381 PANTHER TRANSCRIPTIONAL REPRESSOR PROTEIN YY 12 354 - -
Accr14g00502 381 SUPERFAMILY beta-beta-alpha zinc fingers 117 170 IPR036236 -
Accr14g00502 381 MobiDBLite consensus disorder prediction 194 229 - -
Accr14g00502 381 ProSitePatterns Zinc finger C2H2 type domain signature. 108 130 IPR013087 -
Accr14g00502 381 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 135 IPR013087 -
Accr14g00502 381 SUPERFAMILY beta-beta-alpha zinc fingers 160 193 IPR036236 -
Accr14g00502 381 FunFam Zinc finger transcription factor YY1 207 274 - -
Accr14g00502 381 Gene3D Classic Zinc Finger 77 102 - -
Accr14g00502 381 FunFam Zinc finger protein 410 134 161 - -
Accr14g00502 381 ProSiteProfiles Zinc finger C2H2 type domain profile. 232 262 IPR013087 -
Accr14g00502 381 SUPERFAMILY beta-beta-alpha zinc fingers 80 130 IPR036236 -
Accr14g00502 381 Gene3D Classic Zinc Finger 206 277 - -
Accr14g00502 381 ProSitePatterns Zinc finger C2H2 type domain signature. 234 257 IPR013087 -
Accr14g00502 381 ProSitePatterns Zinc finger C2H2 type domain signature. 79 101 IPR013087 -
Accr14g00502 381 SUPERFAMILY beta-beta-alpha zinc fingers 227 255 IPR036236 -
Accr14g00502 381 SMART c2h2final6 232 257 IPR013087 -
Accr14g00502 381 SMART c2h2final6 136 160 IPR013087 -
Accr14g00502 381 SMART c2h2final6 166 190 IPR013087 -
Accr14g00502 381 SMART c2h2final6 106 130 IPR013087 -
Accr14g00502 381 SMART c2h2final6 77 101 IPR013087 -
Accr14g00502 381 ProSitePatterns Zinc finger C2H2 type domain signature. 168 191 IPR013087 -
Accr14g00502 381 ProSiteProfiles Zinc finger C2H2 type domain profile. 166 195 IPR013087 -
Accr14g00502 381 ProSiteProfiles Zinc finger C2H2 type domain profile. 136 165 IPR013087 -
Accr14g00502 381 ProSitePatterns Zinc finger C2H2 type domain signature. 138 160 IPR013087 -
Accr14g00502 381 MobiDBLite consensus disorder prediction 274 381 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00502 10 367 C2H2 Transcription Factor Family AT4G06634 62.903 1.19e-139 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr14g00502 zf-C2H2 0.00014 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00502 - - pcin:129287230 642.884