Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00501 ATGGAGACACAGTTCAATTACTCTCTCTTCGACCGGCACCGGCACCCCATCATCAAGTCTAAAACTCCTGCTGTTAAATGGGTTAAAGAATGGGTTCCCCAGGATGATGTGGTCACTGGTGGGAAGTGCATGCTTTTCAGATGGGTAAGAGAGGATTTCTTAAAGTCCTTGAAGGACAAGGAAAAAGAACCATCTGTGCCTGAGCCAACTACTGAAGTACTTTTTCTCTGTAGCTATGAAGGCTGTGGGAAAACTTTTATAGATGCTGGTGCTTTGAAAAAGCATTCTCACATCCGTGGAGAGAAGCAATTTGTTTGTGATTATGAGGGTTGTGGAAAGAAATTTCAGGAACTTTCGAAGCTTAAAAGACATAATCTCAGCCATACCGGGGAAAGGGCTCATGTGTGTCCCATTGAAGGCTGTGGTAAGGCGTTCTCCCTTGATTTCAACCTAAAGTCTCACATGAAAACACATTCAGAAGAGAACTACTATGTCTGCAATTATCCAGATTGTGGAAAGAGATACGCTCATGAATCCAAGCTTAAGAACCACATTGCAGTACACCATGAAAAGATTGGTTCTATGTATCCGAATGGGACAAAGTATAATGCTCCACTTTCAGAGAAGCCGACGAAAGCCACAAAACCTTCTGCATCCTCCGATCGCCCTTTTGTTTGTCCTTATGAAGGGTGTGTAAAGGACTATATCCATGAATATAAACTTAATCTCCATTTGAAGAGGGAGCATCCTGGGCATGGTGATGAAAATGTTGCAGAGAATGCCCAGGCTCATAATAACAATGCTGACAATGAAATGGATGAAGCCGTCGATCCGGATACCTATGGCGGGAAACGACCTAATGGTGGTAGAATTCAGAAGCAGAGTAAGCCCAAACCAAGCTTGAAGTTGCCTCCATCAAAAACTGCTCGAAGCAAAGCAAGACCAACACCCTCTTCAATGACCCCTGTGAAGGTAATCAACGAGAAACCTTGGCCAGTGAAAGAAGAAAACTACCAGGAAGAAGACAGCGAAGAAACAGAGGAGGATCGGGACAATGTTGAAGATGGTTGGAGGAGATATGCTGGAAACAATGAGGATGATGATGAAGAAACAGAATATGAAGACTGA 1128 0.4353 METQFNYSLFDRHRHPIIKSKTPAVKWVKEWVPQDDVVTGGKCMLFRWVREDFLKSLKDKEKEPSVPEPTTEVLFLCSYEGCGKTFIDAGALKKHSHIRGEKQFVCDYEGCGKKFQELSKLKRHNLSHTGERAHVCPIEGCGKAFSLDFNLKSHMKTHSEENYYVCNYPDCGKRYAHESKLKNHIAVHHEKIGSMYPNGTKYNAPLSEKPTKATKPSASSDRPFVCPYEGCVKDYIHEYKLNLHLKREHPGHGDENVAENAQAHNNNADNEMDEAVDPDTYGGKRPNGGRIQKQSKPKPSLKLPPSKTARSKARPTPSSMTPVKVINEKPWPVKEENYQEEDSEETEEDRDNVEDGWRRYAGNNEDDDEETEYED 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00501 375 ProSitePatterns Zinc finger C2H2 type domain signature. 136 158 IPR013087 -
Accr14g00501 375 Gene3D Classic Zinc Finger 75 98 - -
Accr14g00501 375 SMART c2h2final6 164 188 IPR013087 -
Accr14g00501 375 SMART c2h2final6 134 158 IPR013087 -
Accr14g00501 375 SMART c2h2final6 75 97 IPR013087 -
Accr14g00501 375 SMART c2h2final6 104 128 IPR013087 -
Accr14g00501 375 SMART c2h2final6 224 249 IPR013087 -
Accr14g00501 375 SUPERFAMILY beta-beta-alpha zinc fingers 158 190 IPR036236 -
Accr14g00501 375 Gene3D Classic Zinc Finger 198 269 - -
Accr14g00501 375 FunFam Zinc finger protein 410 132 159 - -
Accr14g00501 375 ProSiteProfiles Zinc finger C2H2 type domain profile. 134 163 IPR013087 -
Accr14g00501 375 ProSiteProfiles Zinc finger C2H2 type domain profile. 164 188 IPR013087 -
Accr14g00501 375 MobiDBLite consensus disorder prediction 200 218 - -
Accr14g00501 375 Pfam Zinc finger, C2H2 type 164 188 IPR013087 -
Accr14g00501 375 Pfam Zinc finger, C2H2 type 134 158 IPR013087 -
Accr14g00501 375 ProSiteProfiles Zinc finger C2H2 type domain profile. 104 133 IPR013087 -
Accr14g00501 375 ProSitePatterns Zinc finger C2H2 type domain signature. 106 128 IPR013087 -
Accr14g00501 375 PANTHER TRANSCRIPTIONAL REPRESSOR PROTEIN YY 14 347 - -
Accr14g00501 375 SUPERFAMILY beta-beta-alpha zinc fingers 115 167 IPR036236 -
Accr14g00501 375 Gene3D Classic Zinc Finger 133 162 - -
Accr14g00501 375 Gene3D Classic Zinc Finger 163 191 - -
Accr14g00501 375 ProSiteProfiles Zinc finger C2H2 type domain profile. 75 104 IPR013087 -
Accr14g00501 375 MobiDBLite consensus disorder prediction 196 222 - -
Accr14g00501 375 SUPERFAMILY beta-beta-alpha zinc fingers 78 128 IPR036236 -
Accr14g00501 375 Gene3D Classic Zinc Finger 100 132 - -
Accr14g00501 375 MobiDBLite consensus disorder prediction 266 375 - -
Accr14g00501 375 FunFam Putative zinc finger protein 143 101 131 - -
Accr14g00501 375 ProSitePatterns Zinc finger C2H2 type domain signature. 226 249 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00501 14 358 C2H2 Transcription Factor Family AT4G06634 56.831 6.57e-113 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr14g00501 zf-C2H2 0.00066 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00501 - - pcin:129287230 599.742