Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00500 ATGTCTGGAATTAACAGGAATATTCCGGTGGCTTTCAAGCAAGAGGTGGTCTACAAGGAGTGCCTGCATAACCATGCAGCCTCCCTCGGCAAAGTCGCCAGAGATGGTTGCTATGAGTTCCTGCAACCCAACATCGACAGTGGCTTGCCGGAGGCGGCCTTGCTTTGTGCAGTTTGCAACTGCCACCGGAACTTTCACCGGAAACAAGTTGTCTATACTCCAATCATGACAATTGACACCGAAACCTCCCCGCCACAAACCCAGCAACAGCCTGACTTTCCGGCTGAAGCTACAATGGCTGCTGCTGCTGAGGAGAATGCCGACAACGCCATGGTGGTGGAGGCGGCACTGCCGCCACAGCAGCCGCAGCAGAGGAGGAAGAGGAAGACGAGGACCAAGTTCACGGATGAGCAAGTGAGTCGACTGAAAAGTTTTGCCCAAAGGTTGGGGTGGAGGTCGAAGAGCGCCGGCAAGGAAGAGATCCTTAATTTTTGCTCGGAAGTCGGAATCAGTCGTCGTAAGCTTGTTGTGTGGCTCAACAACAACCGGCGAAGACAGAATGCAAATCATCATCAAGCTGATAATGAAAATTAA 594 0.5219 MSGINRNIPVAFKQEVVYKECLHNHAASLGKVARDGCYEFLQPNIDSGLPEAALLCAVCNCHRNFHRKQVVYTPIMTIDTETSPPQTQQQPDFPAEATMAAAAEENADNAMVVEAALPPQQPQQRRKRKTRTKFTDEQVSRLKSFAQRLGWRSKSAGKEEILNFCSEVGISRRKLVVWLNNNRRRQNANHHQADNEN 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00500 197 SUPERFAMILY Homeodomain-like 118 186 IPR009057 -
Accr14g00500 197 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 18 69 IPR006456 -
Accr14g00500 197 Pfam ZF-HD protein dimerisation region 16 70 IPR006456 -
Accr14g00500 197 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 13 184 - -
Accr14g00500 197 Gene3D - 116 189 - -
Accr14g00500 197 ProSiteProfiles 'Homeobox' domain profile. 125 189 IPR001356 GO:0003677
Accr14g00500 197 NCBIfam homeobox domain, ZF-HD class 127 183 IPR006455 -
Accr14g00500 197 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 18 69 IPR006456 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00500 4 183 ZF-HD Transcription Factor Family AT1G69600 33.166 3.59e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Accr14g00500 ZF-HD_dimer 7.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00500 - - pcin:129285637 188.734