Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00469 ATGGCTAAGGATACGGCAATGGAGCTTCCTCCTCGCGACGATTGCTGTCCTGTTTGCCATGGCGATTTCAGCCTCCCATGCCGCACCTCCTGTTCCCACTGGTTCTGCGGAGAGTGCATATTGCGTGTATGGCTACATGGAGATGCATCAAGGCAATGCAAATGCCCAATGTGCTGTCGTCATTTTTCCAGTCTGGCACCTTTTCAAGCAGAATTTGACTGTAGCCAGAACCCGGAATCAACTAAGATCATGGAAAATGTGAGAAGGTACAACAGGTTGCACATTGGGGGCATGCAAGGTCTCATGCAGAAACTTTTTGATCTCCCTTTTCTTGTTCGGATGGCTTTCCAAGATATGATGGATCCTGATAAAACAAGTGCTTACTTGACTAGAGTTCGCCTCTTTGCAATGTTACTTGGCATGATGTATGTGCTCAACCCATTCGAATTTCTCCCATTCGCTAAGCGTGACATATTAAATTTGTTTGATGTCTTTGCAACTACATCTGTAACTATCATCCACATCATCGCGCTGTGCCGTGCAAGGCGTGTAGGCAGGCAATAA 564 0.4645 MAKDTAMELPPRDDCCPVCHGDFSLPCRTSCSHWFCGECILRVWLHGDASRQCKCPMCCRHFSSLAPFQAEFDCSQNPESTKIMENVRRYNRLHIGGMQGLMQKLFDLPFLVRMAFQDMMDPDKTSAYLTRVRLFAMLLGMMYVLNPFEFLPFAKRDILNLFDVFATTSVTIIHIIALCRARRVGRQ 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00469 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 95 IPR013083 -
Accr14g00469 187 SMART ring_2 16 58 IPR001841 -
Accr14g00469 187 ProSiteProfiles Zinc finger RING-type profile. 16 58 IPR001841 -
Accr14g00469 187 Pfam Zinc finger, C3HC4 type (RING finger) 16 58 IPR018957 GO:0046872
Accr14g00469 187 ProSitePatterns Zinc finger RING-type signature. 31 40 IPR017907 -
Accr14g00469 187 SUPERFAMILY RING/U-box 12 66 - -
Accr14g00469 187 PANTHER UNCHARACTERIZED 5 183 IPR038896 GO:0061630
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00469 8 137 C3H Transcription Factor Family AT4G33940 47.692 4.10e-45 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00469 K15707 K24166 qsa:O6P43_012211 237.269