Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00441 ATGGACATGAGAGGTCGTCCTCGCGCTGTCGTCAATGGCGTTAGAAGAACCAGAACCTTCCACTACTTCTGGTGCCAAAATTGCCAGCGAGCCGTCAGAATCCCCTCCCCTGCAAACCCTAATTTCTCTGTTTGCCCCTTTTGCTCCCATCAATTACACCTCGAACTCGATATCGCGACGCCCAGGCTTCTCATGAATAATCCTCCTAATTTACAGCCTTCCCCTGCTTCTCAATTGATCAACGGATTGGCTCTCATTCTAGATCCATCTATGAGAGAGCGAAACACTCGATTGGATCAAAACCGAAATGTTCAATGGATTGAAGAAACCGAAGAAGGACCGAATCCTCAGACCTGGATCACTCTCCGATTTGTGAGACCAAATCGTCCACAAAGACAAATTCCGGGAGCCAACGACGAAAACAGGGCACCACCGGCGGCGGATTCTGCCATAGAAGGGTTGCCGACGGTGAAATTGACGGAAACACAATTGGCAAGTGATCCGATTTGCCCGATTTGCAAAGACGCGTTTGAGATTGATATGGAAGTGAAAGAGTTACCTTGCACGCATTTCTATCATTCAGATTGTATTACTCCTTGGCTTCGAATTCACAATACGTGTCCTATCTGCCGCCATGAGCTGCGAAGCGCTTCATCATCGTCTTCTTCTTCTTATTCCAATTTGCCTGAAGATTTCTCACATTTTGACTATCGATATGGATTTGGGTTTGATGATGCTTCACACGGCTTGAATTGGCTTTGGAGCCAGCTTGCCTCTCTTCGACCTGTTCGTGCTGTAATGGATTGGACTCGGCGATATTTGTTTAATGATCTCCATCAAAATCATGAACGACGAGGAGGAGGTGGCACGTGGTGGTGGCGCTTATTGCTCATCATATAG 900 0.4722 MDMRGRPRAVVNGVRRTRTFHYFWCQNCQRAVRIPSPANPNFSVCPFCSHQLHLELDIATPRLLMNNPPNLQPSPASQLINGLALILDPSMRERNTRLDQNRNVQWIEETEEGPNPQTWITLRFVRPNRPQRQIPGANDENRAPPAADSAIEGLPTVKLTETQLASDPICPICKDAFEIDMEVKELPCTHFYHSDCITPWLRIHNTCPICRHELRSASSSSSSSYSNLPEDFSHFDYRYGFGFDDASHGLNWLWSQLASLRPVRAVMDWTRRYLFNDLHQNHERRGGGGTWWWRLLLII 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00441 299 SMART ring_2 170 210 IPR001841 -
Accr14g00441 299 FunFam E3 ubiquitin-protein ligase RING1-like 134 217 - -
Accr14g00441 299 Pfam Ring finger domain 169 211 IPR001841 -
Accr14g00441 299 SUPERFAMILY RING/U-box 150 216 - -
Accr14g00441 299 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 109 214 - -
Accr14g00441 299 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 217 IPR013083 -
Accr14g00441 299 ProSiteProfiles Zinc finger RING-type profile. 170 211 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00441 6 270 C3H Transcription Factor Family AT1G68180 35.821 2.74e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00441 K11982 - gmx:100793656 294.278