Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00434 ATGCCGAAGTCCAAACGCAACAAAACAGTCACTCTCTCGAAGACAAAGAAAAAGGGAAGGGAACATAAAGAAGCAATAGTAAATGCAATAAAGGAGACTGCTGAAAAATTCAGTTCAGTGTTTGTGTTCTCTTTTGAAAACATGAGAAATAAAAAATTCAAGGAGTTTAGGGAGCAACTGAAATCTACCAGCAGGTTTTTCTTGGGGTCAAACAAAGTCATGCAGGTTGCCCTGGGTCATTCTGCTGCTGATGAGATTAGACCTGGTCTTCATAAGGTTTCTAAGCTTCTACGAGGAGATGCTGGAATGGTTTTTACAAATTTGCCAAAAGAAGAAGTTGAAAGATTATTTAATCAGTTTGAGGAGTATGACTATGCGAGAACAGGAAGCACTGCGACTGAAAAGGTGGAACTCAAAGAAGGTCCTTTGGAGCAGTTCACACATGAGATGGAGCCACTACTACGGAAGCAAGGCATGCCTGTCCGGTTAAATAAAGGAGTGGTGGAACTAGTCTCAGATTTTGTTGTTTGTGAGGAGGGGAAGCCATTGTCACCTGAGGCATCTCGCATTCTGCGTTTACTGGGGATTCAGATGGCCACATTTAAACTTCATCTGATATGCAGATGGGGTCCTGACGATTTTGAACTGTACATGCAAGGACCAGATGATTCAGACGTGGAAACCAATTAG 690 0.4232 MPKSKRNKTVTLSKTKKKGREHKEAIVNAIKETAEKFSSVFVFSFENMRNKKFKEFREQLKSTSRFFLGSNKVMQVALGHSAADEIRPGLHKVSKLLRGDAGMVFTNLPKEEVERLFNQFEEYDYARTGSTATEKVELKEGPLEQFTHEMEPLLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEASRILRLLGIQMATFKLHLICRWGPDDFELYMQGPDDSDVETN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00434 229 Gene3D - 30 210 IPR043141 -
Accr14g00434 229 FunFam Ribosome assembly factor mrt4 125 198 - -
Accr14g00434 229 Pfam Ribosomal protein L10 19 120 IPR001790 -
Accr14g00434 229 Gene3D - 125 198 IPR043164 -
Accr14g00434 229 SUPERFAMILY Ribosomal protein L10-like 20 143 IPR043141 -
Accr14g00434 229 FunFam Ribosome assembly factor mrt4 29 129 - -
Accr14g00434 229 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 1 221 - -
Accr14g00434 229 CDD Ribosomal_P0_like 21 184 IPR033867 GO:0000027
Accr14g00434 229 Pfam Insertion domain in 60S ribosomal protein L10P 126 196 IPR040637 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00434 15 203 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 20.207 7.34e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00434 K14815 - qsa:O6P43_031552 396.356