Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00394 ATGGCTGATGTGGAAGAGTTTCGCTGCTTTGTTGGTGGCCTTTCATGGTCAACATCTGATAGAAAGTTAAAAGATTCATTTGAGAAGTTTGGAAAGCTTCTTGAAGCCAGGGTGGCTGTTGACAAGGTCTCAGGCCGCTCTCGTGGTTTTGGATTTGTAACATTTGATGATCATAAAGCTATGGAAGATGCCATTGAGGCTATGAATGGGATGGATTTAGATGGTCGGACTATCACTGTTGATAAAGCAAAACCTCAACAGGGATCAGCTAGAGATGATGGTGATAGGTACCAAGAACATGGTCGGGATCGCAGTCATAAACGAGATTATGGAGGTGGTCGAGGTTCTAGTGGTGGTGAGTGCTTTAAGTGTGGCAAACCTGGTCATTTTGCTAGAGAGTGTCCCAGTGAAGAGGGAAGAGGTGGAAGGTATGGTGGCAGAGAAAGTAGATATGGTAACAGTGGTGGTGGGGGTCGCTATGGTCCTGATAGGAATTCTGATCGTTATTCAGGTTATTCAGGTGGGCGAAACAGGGATGCTGATAGGTCTGGGGATTATGGAAATGATCGATACAATCGTAGTGACCGTGCTGGACCTTATGAGAGGCGAGGAACAGGAGGTTCTCGTTCCGGATAG 636 0.4638 MADVEEFRCFVGGLSWSTSDRKLKDSFEKFGKLLEARVAVDKVSGRSRGFGFVTFDDHKAMEDAIEAMNGMDLDGRTITVDKAKPQQGSARDDGDRYQEHGRDRSHKRDYGGGRGSSGGECFKCGKPGHFARECPSEEGRGGRYGGRESRYGNSGGGGRYGPDRNSDRYSGYSGGRNRDADRSGDYGNDRYNRSDRAGPYERRGTGGSRSG 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00394 211 MobiDBLite consensus disorder prediction 126 145 - -
Accr14g00394 211 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 10 79 IPR000504 GO:0003723
Accr14g00394 211 CDD RRM2_NsCP33_like 8 83 - -
Accr14g00394 211 MobiDBLite consensus disorder prediction 86 113 - -
Accr14g00394 211 SMART c2hcfinal6 120 136 IPR001878 GO:0003676|GO:0008270
Accr14g00394 211 SMART rrm1_1 8 81 IPR000504 GO:0003723
Accr14g00394 211 Gene3D - 2 116 IPR012677 -
Accr14g00394 211 MobiDBLite consensus disorder prediction 80 211 - -
Accr14g00394 211 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 1 206 - -
Accr14g00394 211 Gene3D - 117 172 - -
Accr14g00394 211 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 85 IPR000504 GO:0003723
Accr14g00394 211 ProSiteProfiles Zinc finger CCHC-type profile. 121 136 IPR001878 GO:0003676|GO:0008270
Accr14g00394 211 MobiDBLite consensus disorder prediction 174 202 - -
Accr14g00394 211 SUPERFAMILY Retrovirus zinc finger-like domains 102 141 IPR036875 GO:0003676|GO:0008270
Accr14g00394 211 Pfam Zinc knuckle 120 136 IPR001878 GO:0003676|GO:0008270
Accr14g00394 211 SUPERFAMILY RNA-binding domain, RBD 4 115 IPR035979 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00394 9 96 Eukaryotic Initiation Factors Gene Family AT1G22760 36.364 2.10e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00394 - - pvy:116124756 293.123