Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00249 ATGGAAGAGGGTGATCAAGAGTTTGATGAGCACATGCGTGACAGCTTTGGAAGAGGAACAGGACCAAAAGAGTACTCGTATGCTGATCTAGCAAGTGCTAAAAATTATTTTAATGATGTGCATAAGCTAGGACAAGGAGGATTTGGGGAGGTTTATAGAGGTTTCCTCAAAGATTCAAACACCGATGTCGCTATAAAGAGAGTATCAGAAACTTCTAAACAAGGATTGAAGGAGTTTGCCTCAGAAGTAATAATTATTAGTCAACTACGGCATCGGAATTTGGTGCAACTAATCGGTTGGTGTCACAAAGGGAAAGTACTACTGCTAGTTTATGAGTATATGCCAAATGGAAGTTTAGATTTTCATCTCTTCGAAGGCCAAAGTTTGCTAAGATGGTCAGCAAGATTCAAAATAGCTCAAGGCTTGGCTTTTGCATTGTTATACTTGCACGAAGGATGGGAACGATGTGTTGTTCATAGAGACATAAAGTCAAGCAATATCATGCTGGACTCTGACTTCAATGCAAAACTCGGAGATTTTGGGTTAGCAAGACTTGTAGACCACACAAAAAGTGCGCCCACTACAGCTTTGGCAGGGACTATGGGATATATGGCTCCTGAATGCCTTATGTTTGGGAGGGTAAGTAAGGAATCTGATGTGTATAGTTTTGGAATTGTTGCCTTGGAGATAGCTTGTGGTAGAAAATGCATAAAACAAAATGCTCCAGAGAATGAAATAAACATAGTGAATTGGGTGTGGGAACTCTATGGAAGTGGGAGAATTCTTGAAGCAGTTGATTTAAGACTACAAGGAGATTTTGACCTAGATCAAATCAAATGTTTGATGATTGTTGGGTTATGGTGTGCTCATCCTGATTATAAGCATAGGCCTTCAATAAGGCAAGCAATTAACGTGCTTAACTTCGAAGTTCCATTTCCTAGTCTTCCTTCAAGTCATCCTGAACTCACATATCATGAACTTCCTCCAATGGAGTCATCTTCTTCAATTCCATCCAGCACCAATGCTTCAGAGGCAAGTCTAAACCAGAACTTAACATTTAGTTCCAACACAAATTCTTCTGGGTTCACTGCAACTTCTTATAATGCTTCACCAACGATGTTGTGA 1125 0.3991 MEEGDQEFDEHMRDSFGRGTGPKEYSYADLASAKNYFNDVHKLGQGGFGEVYRGFLKDSNTDVAIKRVSETSKQGLKEFASEVIIISQLRHRNLVQLIGWCHKGKVLLLVYEYMPNGSLDFHLFEGQSLLRWSARFKIAQGLAFALLYLHEGWERCVVHRDIKSSNIMLDSDFNAKLGDFGLARLVDHTKSAPTTALAGTMGYMAPECLMFGRVSKESDVYSFGIVALEIACGRKCIKQNAPENEINIVNWVWELYGSGRILEAVDLRLQGDFDLDQIKCLMIVGLWCAHPDYKHRPSIRQAINVLNFEVPFPSLPSSHPELTYHELPPMESSSSIPSSTNASEASLNQNLTFSSNTNSSGFTATSYNASPTML 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00249 374 FunFam L-type lectin-domain containing receptor kinase IX.1 22 113 - -
Accr14g00249 374 MobiDBLite consensus disorder prediction 1 20 - -
Accr14g00249 374 MobiDBLite consensus disorder prediction 328 342 - -
Accr14g00249 374 CDD STKc_IRAK 43 307 - -
Accr14g00249 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Accr14g00249 374 ProSitePatterns Protein kinases ATP-binding region signature. 43 66 IPR017441 GO:0005524
Accr14g00249 374 FunFam Lectin-domain containing receptor kinase A4.3 114 326 - -
Accr14g00249 374 Gene3D Transferase(Phosphotransferase) domain 1 114 326 - -
Accr14g00249 374 Gene3D Phosphorylase Kinase; domain 1 22 113 - -
Accr14g00249 374 Pfam Protein kinase domain 38 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr14g00249 374 MobiDBLite consensus disorder prediction 323 342 - -
Accr14g00249 374 ProSiteProfiles Protein kinase domain profile. 37 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr14g00249 374 SMART serkin_6 37 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr14g00249 374 PANTHER - 17 313 - -
Accr14g00249 374 SUPERFAMILY Protein kinase-like (PK-like) 20 308 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00249 18 325 Receptor kinase-like Gene Family AT5G10530 61.736 5.76e-135 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Accr14g00249 Pkinase 2.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00249 - - pcin:129286332 536.569