Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00178 ATGGCTTCTTCAAGCTTTGATTGTTCTATAAACAGCAAAGTGATCAAAAAGCCACTTGAAGCCAACTCTACAAAGTTGCCTCACAAAAAGGGAGCTTGGACACCACAAGAAGATGCCATACTAGCTGAAGTCATCGCAATTCATGGCGCATCAAGGTGGAACTCCCTTGCAGCTAGAGCAGGTCTGAATAGGAATGGTAAGAGTTGCAGGCTAAGATGGTTGAACTATCTGAGACCTAATATCAAGAGGGGGAACATGTCTGACCAAGAAGAGGATTTGATACTTCGCCTTCACAAACTCCTCGGAAACAGGTGGTCTTTGATTGCTGGAAGATTACCGGGACGAACAGATAATGAGATAAAGAACTACTGGAATACTCGTTTGTGCAAGAAAGTGAAGAAGCAGCAATTAGGGTTTTCAACAATAAGAGAAGATCACAAAGACGAAGGAATGATGATGATGGTGGAAGAGATCAAGATTCCTGCACTGGAATCAGAGACAACAGTGGAAAAGAATCCAAATGAAGAAGGTAAAGAATATTCAATCAAGTGTGATGGTTTTGATGAGAGTAGATTCTTTGATTTCTTCGATGAAGGTCCCTTGAATTTGGAGTGGGTTAGCAAATTCCTTGAATTCAATTAG 642 0.4112 MASSSFDCSINSKVIKKPLEANSTKLPHKKGAWTPQEDAILAEVIAIHGASRWNSLAARAGLNRNGKSCRLRWLNYLRPNIKRGNMSDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTRLCKKVKKQQLGFSTIREDHKDEGMMMMVEEIKIPALESETTVEKNPNEEGKEYSIKCDGFDESRFFDFFDEGPLNLEWVSKFLEFN 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00178 213 ProSiteProfiles Myb-like domain profile. 78 128 IPR001005 -
Accr14g00178 213 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 24 164 - -
Accr14g00178 213 ProSiteProfiles Myb-like domain profile. 25 77 IPR001005 -
Accr14g00178 213 CDD SANT 32 77 IPR001005 -
Accr14g00178 213 Gene3D - 86 152 - -
Accr14g00178 213 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 77 IPR017930 -
Accr14g00178 213 Pfam Myb-like DNA-binding domain 30 77 IPR001005 -
Accr14g00178 213 Pfam Myb-like DNA-binding domain 83 126 IPR001005 -
Accr14g00178 213 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 132 IPR017930 -
Accr14g00178 213 FunFam Myb transcription factor 30 82 - -
Accr14g00178 213 SMART sant 29 79 IPR001005 -
Accr14g00178 213 SMART sant 82 130 IPR001005 -
Accr14g00178 213 SUPERFAMILY Homeodomain-like 27 124 IPR009057 -
Accr14g00178 213 Gene3D - 29 82 - -
Accr14g00178 213 CDD SANT 85 128 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00178 13 137 MYB Transcription Factor Family AT3G13540 62.400 1.11e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr14g00178 Myb_DNA-binding 7.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00178 K09422 - rcu:8284657 228.794