Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00115 ATGAGGCTTCCTTCTTTTCACCTTCAGCTCCTATCTCTGCTTTCTGCAACAACAATCCACCACTGTTTCTGCCAACAAGAATACCTAAACAACACAGTTTATAACTGCACTTTCAACCTCACAAAGAAAGCTGGATATGTCTGCAATGGTCTCCACAAGTCATCATCATGCACTTCCTTTGTAACTTTCAGATCAATTCCTCCTTATTATGACACCCCTCTAACCATTTCCAATCTCCTTGGCTCTGAACCATCTTCCATAGCCTCCATCAACAGCAACATCTCAAGCAACAGCAACAAGAAGATTCCTTGGAATCGAACCGTGATTGTTCCGGTCTCTTGTTCGTGTTCAGGCAATCTCTACCAGCATGCTACTTCTTATGAAATGAAAAAAGGAGACTACTACTTCAAATTAGTCAACAACACTTATCGAGGCCTTGTCAATTGCCAGATGTTAGTACGTCAGAATTACTACCTTCCTGAAAATATCAGTATTGGTGCTGAAGTTTCAGTTCCAGTTTTGTGTGCTTGTCCCACGGCGAGACAGATCGAAGATGGGGTCTCCTATTTGCTGGTTCATACACTTGATTATGGGGATTCACTGGAATCAGTTGCAGTGTCTTATGGTGTGGATCAGCACAGTTTGATGGCTGCTAATGAGTTGACTTCAAATGAAACTCTTTCTGCTTTCACTCCTATTTTAGTTCCCCTCAAGCCATCTTCTTGTAGACTCAATCCACATTTGTTCTATTGCACTTGTTCATTCTCTCAGCTTTATCCTTCGAATTCAAGTTTCAATAATCTCAACTGTGGTCATCTTCAACCTGATACTCATCGTTTCCCTGTTAAATTGGTTGCTTCCATAGGTGTTGGTACCGGGGCTGGCTTTTTGTGCTTATTCATTTTGGGTTACAAGCTACATCAATTCATCAAACAAAAACAAGAAAAAATTCGTAAGGAAAAATTGTTTAGGCAAAATGGTGGCCTTTTGCTGCAAGAAAAGATGTCAAATTATGGAAATAGAGAAAGCACAAAACTTTTCACAGCAGAAGAACTGGAACGAGCAACAGATAGCTACAATCAAAGTAGGTTTCTTGGTCAAGGTGGGTATGGAACTGTTTATAAAGGAATGTTACCAGATGGTGCCATTGTTGCAGTTAAGAAGTCAAGAGAAATTGCAAGAAACCAGATTGAGACATTTGTTAATGAAGTTGTTATTCTATCCCAAATAAATCATAGGAACATTGTCAAACTCCTAGGTTGTTGCCTAGAGACTGAAAACCCATTATTAGTTTATGAGTTTATTCCGAATAGAACACTCTCTCACCACATCCATAACAAGGAACTCAAATCAAACCTCTCATGGGACAACCGATATAGAATTGCTTGTGAGGTGGCCGGGGCGCTGGCATATATGCATTTTGCAGCTTCCATTCCCATCTTCCATAGAGACATCAAAACTTCCAACATACTTCTAGATCATAATTACAATGCCAAAGTTTCTGATTTTGGGTCTTCCAGATCAGTTCCAGATGATAGGACTCACTTAACCACAGCAGTACAAGGCACTTTTGGGTACATCGATCCTGTGTACTTTCAAACAAGCCAATTCTCAGATAAAAGTGATGTGTATAGTTTTGGGGTTGTCCTTGTAGAGCTCATTACTGGAAGAAAACCCTTCTTAGAACAAGCTGAGGGTCAAAATCTTGTTGCAGACTTCATTTCATTAATGGAGAATGACCAAGTTTTGGAGATTTTGGATGCTAGAGTTGTTAATGAAGGAGGGGAGGGTGATATTCTTGGCATTGCAAATCTTGCAATGAGGTGTTTGAGACTCAATAGGAAGAAGAGACCCACAATGAAAGAGGTTTCAACAGAGCTAGAAGCAATGAGAAAGACGCCAAATGCCTTAGAGATCACTGAATGTTCTCGTGAGTTTCCAAATGGTAAGGACATCAGCTCTTCTTTTGGAACAATCCAAGAATCCACAGAAGAAAGCACGTCATTATTTCTCCAAATGGATTCCACATCCTTCTGA 2037 0.4016 MRLPSFHLQLLSLLSATTIHHCFCQQEYLNNTVYNCTFNLTKKAGYVCNGLHKSSSCTSFVTFRSIPPYYDTPLTISNLLGSEPSSIASINSNISSNSNKKIPWNRTVIVPVSCSCSGNLYQHATSYEMKKGDYYFKLVNNTYRGLVNCQMLVRQNYYLPENISIGAEVSVPVLCACPTARQIEDGVSYLLVHTLDYGDSLESVAVSYGVDQHSLMAANELTSNETLSAFTPILVPLKPSSCRLNPHLFYCTCSFSQLYPSNSSFNNLNCGHLQPDTHRFPVKLVASIGVGTGAGFLCLFILGYKLHQFIKQKQEKIRKEKLFRQNGGLLLQEKMSNYGNRESTKLFTAEELERATDSYNQSRFLGQGGYGTVYKGMLPDGAIVAVKKSREIARNQIETFVNEVVILSQINHRNIVKLLGCCLETENPLLVYEFIPNRTLSHHIHNKELKSNLSWDNRYRIACEVAGALAYMHFAASIPIFHRDIKTSNILLDHNYNAKVSDFGSSRSVPDDRTHLTTAVQGTFGYIDPVYFQTSQFSDKSDVYSFGVVLVELITGRKPFLEQAEGQNLVADFISLMENDQVLEILDARVVNEGGEGDILGIANLAMRCLRLNRKKRPTMKEVSTELEAMRKTPNALEITECSREFPNGKDISSSFGTIQESTEESTSLFLQMDSTSF 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00115 678 Gene3D LysM domain 188 243 IPR036779 -
Accr14g00115 678 ProSiteProfiles LysM domain profile. 191 235 IPR018392 -
Accr14g00115 678 CDD LysM 192 229 IPR018392 -
Accr14g00115 678 ProSiteProfiles Protein kinase domain profile. 359 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr14g00115 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Accr14g00115 678 SUPERFAMILY Protein kinase-like (PK-like) 340 627 IPR011009 -
Accr14g00115 678 Gene3D Transferase(Phosphotransferase) domain 1 435 645 - -
Accr14g00115 678 SMART LysM_2 192 236 IPR018392 -
Accr14g00115 678 Gene3D Phosphorylase Kinase; domain 1 327 434 - -
Accr14g00115 678 SMART serkin_6 359 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr14g00115 678 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 100 635 IPR045274 GO:0007166
Accr14g00115 678 ProSitePatterns Protein kinases ATP-binding region signature. 365 388 IPR017441 GO:0005524
Accr14g00115 678 CDD STKc_IRAK 365 628 - -
Accr14g00115 678 FunFam Wall-associated receptor kinase 2 435 647 - -
Accr14g00115 678 FunFam Wall-associated receptor kinase 2 329 434 - -
Accr14g00115 678 Pfam LysM domain 193 236 IPR018392 -
Accr14g00115 678 Pfam Protein kinase domain 359 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00115 289 633 Receptor kinase-like Gene Family AT1G16130 54.728 5.76e-129 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr14g00115 Pkinase 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00115 - - vun:114186184 796.578