Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00096 ATGGATGATGCAGAAGAGAATGGGTTCTGTGTTACTTTTGATGATTTCTGTGATCTTAACAATAATACTAATAACAATAATAATGGAGGCAGTATCAGAAGAAGCATGATCAGAAAGAGAAGATATGGTGACAGTAATAATAATGATAATGATAATATGAACAACAACCAAGTAGAAGAAGAAGAAAATGAAGATATAATATTCAAATCCAAGAACCTCAAGACTGAGAGAAAGAGGAGAGAGAAGCTCAGTAGCAGACTTTTATTGCTTCGATCTTTAGTCCCAAACATCACAAATATGACCAGAGCCTGCATAATTGACGATGCCATAACCTACATCAATCAAATGCAAATCCAGGTGGAGACTCTCACTCAGGAGCTTCAAGCAATAGAGGCGAAGTCGAATCTGCGGCTGCCACCGCCAACAAGAGCCGCCACCGATCAGCCAAAGGTGGAGAGAAGAAGAGATGAATCAGACGGGGAAGAAGAGGAGGAGGAGATGATGAAGAAATGTGGGATTCAGGTAGAAGTGAAAGTGAGTGAGATTGGTGTGAACAAGCTGTGGATGAAGATGATCATTGAGAAGAAAAGAGGAAAAATCATGAAACTTATAGAAGCCATTAATTCTTTTGGCATTGCTCTGTTAGACACTAATGTCACCACCATAAAAGGAGCTTTCATCATCACTACCTCCATTCAGGGAAAGAATGGTGAAAGGCTTGGAGCAGAGGAAACCCAAGAGTTGATGCTTGATATGGTTAGGGCTTTATAG 771 0.4021 MDDAEENGFCVTFDDFCDLNNNTNNNNNGGSIRRSMIRKRRYGDSNNNDNDNMNNNQVEEEENEDIIFKSKNLKTERKRREKLSSRLLLLRSLVPNITNMTRACIIDDAITYINQMQIQVETLTQELQAIEAKSNLRLPPPTRAATDQPKVERRRDESDGEEEEEEMMKKCGIQVEVKVSEIGVNKLWMKMIIEKKRGKIMKLIEAINSFGIALLDTNVTTIKGAFIITTSIQGKNGERLGAEETQELMLDMVRAL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00096 256 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 45 233 - -
Accr14g00096 256 MobiDBLite consensus disorder prediction 24 63 - -
Accr14g00096 256 Coils Coil 113 133 - -
Accr14g00096 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 69 133 IPR036638 GO:0046983
Accr14g00096 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 116 IPR011598 GO:0046983
Accr14g00096 256 Gene3D - 55 133 IPR036638 GO:0046983
Accr14g00096 256 MobiDBLite consensus disorder prediction 134 167 - -
Accr14g00096 256 SMART finulus 73 122 IPR011598 GO:0046983
Accr14g00096 256 Pfam Helix-loop-helix DNA-binding domain 72 117 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00096 57 255 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 39.196 3.38e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr14g00096 HLH 4.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00096 - - pcin:129286892 270.781