Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00078 ATGATCATCAATACTCTCTTATTCCTTCTCTTCCTTCTTCATCATGCATCTAGTCGCTCTCTTAATAGAATAACCCCCAGCCAACCTCTCAGAGACGGCGACGTTTTGCTTTCCGACACAGCCACATTCGCCCTCGGTTTCTTCACTCTCTCGAATACTTCCAGAAACCGATATGTCGGAATCTGGTACAACAAAGTTTCAATACAAAGCGTGGTTTGGGTTGCTAATAGAGACAATCCTCTTAATGACACTTCTGGTGTTCTCTCCATCAACACCCACCGAAACGTCGTCGTTTCCCTCAGCAACACAAGGACCACCGGCCTCAACCCGGTTTGGTCTTCCAATGGATCTTTCTCATCATCTTCTTCCATCACTAATACCTTCGCTAAGCTTCTAGATACAGGAAACTTGGTTTTGATAGAAGAAGATGGAGGAATACAGAGAATTCTATGGCAGAGTTTTGATTATCCTTGTGACACCATGATGCCGTTTATGAAACTCGGGATAGATCGTAAGACCGGTTTGAACCGCTTCCTGACGTCATGGAAATCCTCCGACGATCCAGGATTCGGGAACGTGACTTATCGGATCAACCCAACAGGGTATCCTCAGTTATACATGTACAGAAACGGGAATCCGATCTGGAGGGTTGGATCTTGGACGGGTAAAAGATGGAGCGGTGTACCCGATATGACACCCAACTTCATCTTCACCGTAGCTTTTGTCAACAACGCTACTGAAGTTACCGTAATGTATGGTGTGAATGACCCTTCCGTTTTCACCAGAATGGTTCTTGAGAACTCTGGTCAAGTGAGACGGACGACGTGGCAAACTCAAGAACATCGATGGTTTGAGATCTGGAAGGGTCCAAAAGAGGACTGTGACAACTTCCGCCGGTGCGGGTCAAATAGTAACTGTAACCCGTACAATCCGCAGACGTTTGAGTGTGTGTGTCTGCCCGGATTTGAACCCAAGAACCCGAGAGAATGGTACCTCAGAGACGGGTCGGCTGGGTGCTTGAGGAAGAAGAACGTCTCCACGTGTCGAAGCGGTGAAGGGTTCGTGAAGTTAACGCGTGTGAAGGTGCCGGATACGTCCAAAGCGCGTGTAGATCTAAGCCTTAGCATGAAAGCATGTAGGGAGAAGTGCCTGGGGGATTGTTCATGTGCTTCGTATACGACTGCAAACGAGAGCTCATTCACTGGGTGTATGACGTGGCATGCTGACATGGAAGATATTAGGACGTACAGCAGTGTCGGACAGGATCTCTATGTACGTGTGGATGCAGTTGAATTAGCTAAGTACAGAAAGAAGCCCTTTGGTTCACTTGGCATGAAAGGGATGATTTCACTCTTAGTCGTTTCCATATTACTAGTATTGTTTCTGGTGATGTCTTTCATATATTGTCTTATAAAGAACAAGAAACAAGCAAGAAAGCATAGCAAAAATTTGTTTAACTACAGCTTTGAGAACTCTCTGAGTATGGATGACTTTAGCAGTGGGAAAAATTTAGATTTACCATTATTTGATCTTATTGACATAGCTGCAGCAACTGAAAACTTCTCTGATGCTAACAAGCTTGGACATGGTGGTTTTGGTTCGGTTTATAAGGGTTTGCTGAGTAATGGAATGGAAATAGCTGTGAAGAGGCTATCAAAGTACTCTGGCCAAGGCATTGAGGAGTTCAAAAATGAGGTTGTTTTAATTGCAAAGCTGCAACATAGAAATCTTGTGAGAATCTTGGGTTGTTGCATACATGGAGAAGAGAAGATGTTGATCTATGAGTATTTGCCAAATAAAAGTTTGGACTTTTTCATATTTGATCGAGAAAGTAAGTTACAACTGAACTGGAGGAAACGGTTTGATATCATATGTGGGATTGCAAGAGGAATCTTATATCTTCATCAAGATTCAAGATTGAGAATCATTCATAGAGACTTGAAGGCTAGTAATGTCTTGTTGGACTCCGAATTAAAACCAAAAATTGCTGATTTTGGTATGGCTAGAATATTTGGTGGAGATCAAATTGAAATAAACACAAAACGTGTTGTCGGAACCTATGGCTACATGTCACCTGAATATGCAATGGAAGGACTATTCTCAGTAAAGTCTGATGTGTATAGCTTTGGAGTGTTGCTTCTGGAGATTGTTACTAGCAAAAAGAATAGTGGTCATTACGAAGAAATTACCTCAACTTTGGTTGGACATATTTGGGACCTATGGAGAGAAGATAGAGCTGTGGAGATTGTTGATCCTTCATTATTAGTAGATGATGATGCTTGCCCTAATGAGATTCTAAAATGCATCCAAATTGGTCTTTTATGTGTACAAGACTATGCAGCTGACAGACCAACAATGTCAACAGTTGTTTCCATGTTGGGAAATGACTCATCTCTTCCTTCTCCAAAACAACCAGCTTTTATTTTCAAAAGAAATAAACCTGGTGACAAATCAAATCCTTCAACCAGTGAAGGATTTAATTCAGTAAATGGGATGAGTACTACTATGGTTGAAGCTCGCTAA 2523 0.4229 MIINTLLFLLFLLHHASSRSLNRITPSQPLRDGDVLLSDTATFALGFFTLSNTSRNRYVGIWYNKVSIQSVVWVANRDNPLNDTSGVLSINTHRNVVVSLSNTRTTGLNPVWSSNGSFSSSSSITNTFAKLLDTGNLVLIEEDGGIQRILWQSFDYPCDTMMPFMKLGIDRKTGLNRFLTSWKSSDDPGFGNVTYRINPTGYPQLYMYRNGNPIWRVGSWTGKRWSGVPDMTPNFIFTVAFVNNATEVTVMYGVNDPSVFTRMVLENSGQVRRTTWQTQEHRWFEIWKGPKEDCDNFRRCGSNSNCNPYNPQTFECVCLPGFEPKNPREWYLRDGSAGCLRKKNVSTCRSGEGFVKLTRVKVPDTSKARVDLSLSMKACREKCLGDCSCASYTTANESSFTGCMTWHADMEDIRTYSSVGQDLYVRVDAVELAKYRKKPFGSLGMKGMISLLVVSILLVLFLVMSFIYCLIKNKKQARKHSKNLFNYSFENSLSMDDFSSGKNLDLPLFDLIDIAAATENFSDANKLGHGGFGSVYKGLLSNGMEIAVKRLSKYSGQGIEEFKNEVVLIAKLQHRNLVRILGCCIHGEEKMLIYEYLPNKSLDFFIFDRESKLQLNWRKRFDIICGIARGILYLHQDSRLRIIHRDLKASNVLLDSELKPKIADFGMARIFGGDQIEINTKRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVTSKKNSGHYEEITSTLVGHIWDLWREDRAVEIVDPSLLVDDDACPNEILKCIQIGLLCVQDYAADRPTMSTVVSMLGNDSSLPSPKQPAFIFKRNKPGDKSNPSTSEGFNSVNGMSTTMVEAR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00078 840 PIRSF SRK 1 840 IPR024171 GO:0004674
Accr14g00078 840 Gene3D Transferase(Phosphotransferase) domain 1 597 802 - -
Accr14g00078 840 ProSiteProfiles EGF-like domain profile. 290 328 IPR000742 -
Accr14g00078 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 486 596 - -
Accr14g00078 840 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Accr14g00078 840 Pfam Domain of unknown function (DUF3403) 795 840 IPR021820 GO:0004674
Accr14g00078 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 188 IPR036426 -
Accr14g00078 840 CDD PAN_AP_plant 346 427 - -
Accr14g00078 840 ProSiteProfiles Protein kinase domain profile. 521 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr14g00078 840 MobiDBLite consensus disorder prediction 815 840 - -
Accr14g00078 840 Gene3D Phosphorylase Kinase; domain 1 485 596 - -
Accr14g00078 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 597 801 - -
Accr14g00078 840 Pfam Protein tyrosine and serine/threonine kinase 525 793 IPR001245 GO:0004672|GO:0006468
Accr14g00078 840 SMART serkin_6 521 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr14g00078 840 SMART ntp_6 349 427 IPR003609 -
Accr14g00078 840 CDD STKc_IRAK 527 793 - -
Accr14g00078 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Accr14g00078 840 Pfam PAN-like domain 348 413 IPR003609 -
Accr14g00078 840 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 784 - -
Accr14g00078 840 Pfam S-locus glycoprotein domain 215 326 IPR000858 GO:0048544
Accr14g00078 840 ProSiteProfiles Bulb-type lectin domain profile. 21 152 IPR001480 -
Accr14g00078 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 16 154 - -
Accr14g00078 840 SUPERFAMILY Protein kinase-like (PK-like) 505 793 IPR011009 -
Accr14g00078 840 Gene3D - 17 154 IPR036426 -
Accr14g00078 840 MobiDBLite consensus disorder prediction 810 840 - -
Accr14g00078 840 SMART blect_4 27 157 IPR001480 -
Accr14g00078 840 CDD B_lectin 27 157 IPR001480 -
Accr14g00078 840 ProSiteProfiles PAN/Apple domain profile. 348 428 IPR003609 -
Accr14g00078 840 Pfam D-mannose binding lectin 71 183 IPR001480 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00078 502 822 Receptor kinase-like Gene Family AT4G23250 60.366 5.53e-125 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr14g00078 PK_Tyr_Ser-Thr 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00078 - - gmx:100812814 1165.6