Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00028 ATGGAAGACATCAGAACATTTGACAATGTTGGCCAAGATTTGTACGTGCGTGTGGATGAACATGAATTGGCTAAATATGGAAGGAAGAAGCGTGATGGTTCTCTGGGCAAGGAGGGAATGGTGACTCTTGTAACCATTTCTATTTGCCTAATAATATTCCTGGTGATTTCTTTAGTGTATTGGTTTGTAAAGTACAATAATCAAGCAAAAAGGTTGCACAAAGATTATTTGTTTGATGGAGAAAACAATTCCGATGTAACTCTCTTTGATCTAGAGGACATAGTTGGGGCAACGGACAATTTCTCAGACACTAATATGCTTGGAAAAGATGGTTTTGGTTCTGTATATAAGGGCCTACTCAAAGATGGACTGGAAATAGCAGTAAAGAGGCTATCGAAGTATTCTAGACAAGGCATTGAAGAATTCAGAAATGAGGTTACTTTAATTGCAAAGCTCCAACATAGAAATCTTGTGAGGATCTTAGGTTGTTGCATAGATGGAGAAGAGAAGATGTTGATATATGAATATTTGCCAAACAAAAGCTTGGACTCTTTCATTTTTGATCAAGTAAAAAGATTACAATTAGATTGGCGGAAAAGATTTGACATCATTTGTGGAGTTGCAAGAGGAATTTTATACCTTCATGAAGATTCAAGATTACGAATAATTCATAGAGACTTGAAGGCTAGCAACGTCTTGTTAGATTCCACAATGAATCCAAAAATTGCAGATTTTGGTATGGCAAGAATATTTGATGGAGACCAAACTGAAGCAAACACAAACTGTGTTGTTGGAACCTATGGTTATATGTCACCAGAATATGCTATGGAAGGAATTTTCTCAATAAAATCAGATACATATAGCTTTGGAGTATTACTTTTGGAGATTGTTACTAGCAGAAAAAATAGTGATCATTATGACGATGTTTCTTCTACTTTGGTTGGACATATTTGGAACCTTTGGAGAGAAAGTAGAGTTATGGAGATTGTTGATCCATCATTAATGGGTGAAACATGCCCTAAATATGAAGTTCTGAAATGCATCCAGATTGGACTTTTATGTGTGCAAGAATATGTAACAGATAGGCCAACTATGTCAGAAGTTGTTTCCATGTTGGATAATGATTCGACTCTTGCTCCTCCAAAGCAAGCAGCATTTCTTTTCAAGAAACCTAAGTGTGATGATCCAAATTTGTCAATCAGTGAAGGGGTTAATTCAATAAATGAGATGAGTACTACAGTGGTCGAAGCTCGTTGA 1257 0.362 MEDIRTFDNVGQDLYVRVDEHELAKYGRKKRDGSLGKEGMVTLVTISICLIIFLVISLVYWFVKYNNQAKRLHKDYLFDGENNSDVTLFDLEDIVGATDNFSDTNMLGKDGFGSVYKGLLKDGLEIAVKRLSKYSRQGIEEFRNEVTLIAKLQHRNLVRILGCCIDGEEKMLIYEYLPNKSLDSFIFDQVKRLQLDWRKRFDIICGVARGILYLHEDSRLRIIHRDLKASNVLLDSTMNPKIADFGMARIFDGDQTEANTNCVVGTYGYMSPEYAMEGIFSIKSDTYSFGVLLLEIVTSRKNSDHYDDVSSTLVGHIWNLWRESRVMEIVDPSLMGETCPKYEVLKCIQIGLLCVQEYVTDRPTMSEVVSMLDNDSTLAPPKQAAFLFKKPKCDDPNLSISEGVNSINEMSTTVVEAR 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00028 418 SMART serkin_6 101 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr14g00028 418 ProSiteProfiles Protein kinase domain profile. 101 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr14g00028 418 SUPERFAMILY Protein kinase-like (PK-like) 82 372 IPR011009 -
Accr14g00028 418 Gene3D Transferase(Phosphotransferase) domain 1 177 384 - -
Accr14g00028 418 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 177 380 - -
Accr14g00028 418 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 65 176 - -
Accr14g00028 418 Pfam Protein tyrosine and serine/threonine kinase 105 372 IPR001245 GO:0004672|GO:0006468
Accr14g00028 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Accr14g00028 418 Gene3D Phosphorylase Kinase; domain 1 63 176 - -
Accr14g00028 418 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 412 - -
Accr14g00028 418 CDD STKc_IRAK 107 374 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00028 89 418 Receptor kinase-like Gene Family AT4G11530 55.325 1.46e-127 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr14g00028 PK_Tyr_Ser-Thr 9.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00028 - - pcin:129284814 664.84