Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr14g00022 ATGACAGGAGCTTTGATAGGCCAAGAGACTGAGAGTGGTTTCATTAGAGGAGCAGCAGTTGGTGCCATAACCGGAGCTGTTTTCTCCATTGAAGTATTTGAATCTTCTCTTGTTCTTTGGCAATCTGATGAATCTGGGATTGGGTGTCTTTTATATCTGATTGATGTCATTGCTAGCCTACTGAGTGGGAGACTTGTGCGTGAGAGGATTGGCCCTGCCATGTTAAGTGCTGTCCAAAGTCAGATGGGTGCTGTTGAAACAAACTTTGAGGAGGTTCAGAACATCTTTGACACTGGTGGTTGCAAGGGTTTAACAGGAGATTCTGTTGAAAAGATCCCAAAGATCACAATCACAAATGATAATAATATTGATGCTTGGGGTGAAAGAGTTTCTTGTTCAGTCTGCCTCCAGGACTTTCAGCCCGCAGAGACAGTTAGAAGTTTGCCCCATTGCCATCATATGTTCCACCTACCATGCATAGACAAGTGGCTCTTCAGGCACGGTTCATGTCCGTTATGTAGAAGGGATCTGTAA 534 0.4438 MTGALIGQETESGFIRGAAVGAITGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVETNFEEVQNIFDTGGCKGLTGDSVEKIPKITITNDNNIDAWGERVSCSVCLQDFQPAETVRSLPHCHHMFHLPCIDKWLFRHGSCPLCRRDL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr14g00022 177 SMART ring_2 132 173 IPR001841 -
Accr14g00022 177 SUPERFAMILY RING/U-box 131 177 - -
Accr14g00022 177 Pfam Ring finger domain 131 174 IPR001841 -
Accr14g00022 177 FunFam NEP1-interacting protein-like 1 92 177 - -
Accr14g00022 177 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 177 IPR013083 -
Accr14g00022 177 CDD RING-H2_NIPL1-like 131 174 - -
Accr14g00022 177 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 1 176 IPR044523 -
Accr14g00022 177 ProSiteProfiles Zinc finger RING-type profile. 132 174 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr14g00022 1 177 C3H Transcription Factor Family AT5G66070 81.921 1.35e-102 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr14g00022 - - cave:132170988 328.946