Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01717 ATGCTCAAAGAAAGTAACCGTAATGGTGTCGCCAGTAATAATAGCTGGGCACGTATCTGTGACATGTGCCGTGCTGCTCCCTACACTGTTTATTGTCGCGCTGACATGGCTTACCTCTGCACTGGCTGTGACGCTCGCATCCACGCTGCCAACCGCGTCGCATCCCACCGCATTTCTCTACAAGGCCGATGTCGCCTCCCTTTGCTCTGCCTGCGACGCCAACATCCACTCCGCCAATCCCCTTGCTAG 249 0.5582 MLKESNRNGVASNNSWARICDMCRAAPYTVYCRADMAYLCTGCDARIHAANRVASHRISLQGRCRLPLLCLRRQHPLRQSPC 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01717 82 CDD Bbox1_BBX-like 19 55 - -
Accr13g01717 82 Pfam B-box zinc finger 18 58 IPR000315 GO:0008270
Accr13g01717 82 ProSiteProfiles Zinc finger B-box type profile. 15 61 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01717 Accr-Chr13 32874648 32874896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01717 1 55 C2C2-CO-like Transcription Factor Family AT3G02380 67.857 2.49e-17 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr13g01717 zf-B_box 1.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01717 - K12135 fve:101302475 91.2781