Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01711 ATGGATATAGATCTTAGATTACCTTCTGGTGAGCATGATAAAGAGGATGAAGAGCCAAATACAATTGATAACTTACTAGATGGTGATGAAAAATTTCATAACGTAGACGTAGAAGGAAGAAATATAGTTGATGCTGGTGTATCTGCTCTAGATGGCGGAGATTTGAATTCCCCAACATTGGATATGGCAATATTTAAGGAAGATACAAATCTTGAACCACTTTCTGGCATGGAATTTGATTCTCATGGGGAAGCTTATTCTTTCTACCAAGAGTATGCTCGGTCAATGGGATTCAACACAGCAATTCAAAATAGTCGCCGTTCAAAAACATCAAGAGAATTTATAGATGCAAAGTTTGCTTGTTCCAGATATGGAACTAAACGGGAGTATGACAACAAATCATTTAGTCGACCACGAGCAAGACAGAATAAGCAGGAGTTCGAAAATTCAACTAGCAGGAGACCTTGTTCAAAGACTGATTGTAAAGCAAGCATGCACGTAAAAAGAAGGTCAGATGGAAAATGGGTTATACATAGTTTTGTGAAGGAGCATAACCATGAGCTTTTACCAGCCCAAGCTGTCAGTGAACAAGCAAGGAAAATGTATGCTGCAATGGCTAGACAGTTCGCTGAATACAAAACTGTAGTTTGTCTAAAAAATGAGAAAAGTCCATTTGATAAAGGTCGGAATTTTGGCCTGGAGACTGGGGATGTCAAACTTCTGCTTGACATCTCCATACAGATGCAAAACATGAATTCTAACTTCTTTTATGCTGTAGACATTGGAGAGGATCAACGGGTGAAAAGCCTTTTATGGCTTGACGCTAAATGTAGGCATGACTATATCAACTTTTGTGACGTAGTTTCTTTTGACACCACCTATGTGAGGAACAAATATAAGACGCCTCTTGCACTTTTTGTTGGAGTAAATCAGCATTATCAATTTATGTTGCTTGGCTGTGCCTTTATATCAGATGAAACTGCCACAACTTATTCTTGGCTCATGCAGACATGGCTGAAAGCAGTTGGGGGTCAAGTTCCTAAAGTGATAATTACTGACCATGACAAGACACTCAAGTCAGTGATTTCAGATGTATTCCCCCATGCTCATCATTTTATGTGCCTATGGCACATATTTGGGAAGGTAACTGAAAAATTGGGTCATGTCATTAAACAACATGAGAATTTTATGGCAAAATTTGAAAAATGCATCCATAGGTCGTGGACAAGTGATGAGTTTGAGACGAGGTGGTGGAAAATGGTTGATAGGTTTGAACTCCGAGAGGATGAATACATGCAGACATTGTATGAAGATTGCAAATTATGGGTGCCGACATTCATGAAGGATGTATTTTTAGGGGGTATGTGTACCATCCAGCGATCTGAAAGCATAAATTCCTTCTTTGATAAATATGTTCACAAGAAGACCACTGTACAAGATTTTGTCAGACAGTATGAAACAATATTGCATGACAGGTATGAAGAGGAAGCAAAAGCAGATTCTGATACTTGGAATAAAGTGGCAGCGTTGAAAACTCCTTCACCTTTAGAGAAGAGTGTTGCTGGAATTTACACACATGCAGTATTTAAAAAGATTCAGGTTGAGGTCATTGGTGCAGTTGCTTGTCATCCTAAACCTGAAAAGCAGGATGATGCAAGCATTACTTACAAGGTTCATGATATGGAAAGGAATCAAGAATTCACAGTTGTGTTGAATGAACTAAAATCAGAGGTGTCTTGTATATGTCGGTTATTTGAATATAAAGGTTATCTTTGTCGACATGCATTGATTGTTCTACAATATTCTCGCCTTTCAGCAATTCCTTCTCAATACATTTTGAAAAGATGGACAAGAGATGCAAAGTCAAGGCATTTACTTGGGGAACAATCAGATCATATGCTGGCTAGGGTACATCGGTACAATGATTTAACTCAGAGAGTACTTAAACTGAGTGAAGAGGGATCTCTATCTCACGAGAGTTATAGTATTGCATTCCATGCACTTCATGAGGCATATTCAAGTTGTGTGAGTGTTAACAATTCCAGTAAAGATCCTGCAGAAGCAGTCACATCAGCTGGTCATGCTCAGCTTTCCCCTGAAGAAGATACCCGGAGTAAAAATATGGGAAAGACAAACAGAAAGAAGAATCCAGCTAAAAAGAAAAAGTTGAACTCTGAGGCAGAAGCGATGACTGTTGGGGCTCAAGACAACTTGCAACAAATGGAGAAGTTCAACACTAGGGCTGTAACACTAGATGGTTATTATGGTGCTCAACAGAGCGTACAAGGAATGTTAAACTTGATGGGACCAACTCGTGATAATTACTATGGAAATCAACAGACTATTCAGGGCCTGGGACAATTAAGTTCAATACCACCAAGCCATGATGGTTATTATGGTGCTCATCAGAGCTTGCCTGGTCTGGCGCAACTGGATTTTTTCCGAGCATCAACAGGCTTTGCTTATGGCATTCGGGATGATCCTAACGCAAGAGCAGCACAATTGCATGAAGATCCATCAAGACATGCATGA 2532 0.3945 MDIDLRLPSGEHDKEDEEPNTIDNLLDGDEKFHNVDVEGRNIVDAGVSALDGGDLNSPTLDMAIFKEDTNLEPLSGMEFDSHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDNKSFSRPRARQNKQEFENSTSRRPCSKTDCKASMHVKRRSDGKWVIHSFVKEHNHELLPAQAVSEQARKMYAAMARQFAEYKTVVCLKNEKSPFDKGRNFGLETGDVKLLLDISIQMQNMNSNFFYAVDIGEDQRVKSLLWLDAKCRHDYINFCDVVSFDTTYVRNKYKTPLALFVGVNQHYQFMLLGCAFISDETATTYSWLMQTWLKAVGGQVPKVIITDHDKTLKSVISDVFPHAHHFMCLWHIFGKVTEKLGHVIKQHENFMAKFEKCIHRSWTSDEFETRWWKMVDRFELREDEYMQTLYEDCKLWVPTFMKDVFLGGMCTIQRSESINSFFDKYVHKKTTVQDFVRQYETILHDRYEEEAKADSDTWNKVAALKTPSPLEKSVAGIYTHAVFKKIQVEVIGAVACHPKPEKQDDASITYKVHDMERNQEFTVVLNELKSEVSCICRLFEYKGYLCRHALIVLQYSRLSAIPSQYILKRWTRDAKSRHLLGEQSDHMLARVHRYNDLTQRVLKLSEEGSLSHESYSIAFHALHEAYSSCVSVNNSSKDPAEAVTSAGHAQLSPEEDTRSKNMGKTNRKKNPAKKKKLNSEAEAMTVGAQDNLQQMEKFNTRAVTLDGYYGAQQSVQGMLNLMGPTRDNYYGNQQTIQGLGQLSSIPPSHDGYYGAHQSLPGLAQLDFFRASTGFAYGIRDDPNARAAQLHEDPSRHA 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01711 843 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 67 675 IPR031052 GO:0006355
Accr13g01711 843 MobiDBLite consensus disorder prediction 1 20 - -
Accr13g01711 843 Pfam SWIM zinc finger 569 601 IPR007527 GO:0008270
Accr13g01711 843 MobiDBLite consensus disorder prediction 683 726 - -
Accr13g01711 843 SMART 26again6 578 605 IPR006564 GO:0008270
Accr13g01711 843 MobiDBLite consensus disorder prediction 132 160 - -
Accr13g01711 843 Pfam FAR1 DNA-binding domain 87 190 IPR004330 -
Accr13g01711 843 ProSiteProfiles Zinc finger SWIM-type profile. 567 603 IPR007527 GO:0008270
Accr13g01711 843 Pfam MULE transposase domain 287 379 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01711 Accr-Chr13 32666043 32669377 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Accr13g01711 FAR1 9.6e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01711 - - gmx:100817034 1412.9