Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01701 ATGGAATCATCAAAACCCAACATCATTCCAGGATTTTCGATGTTCTTCTTCATAGTTATAAGCTTCATCAGAACAAGTACTTCTCAGACATCCAACTACGTTGGAGATGACTGCCATAACAAAACCCCACAAACTCTTACTTCATCGTACAAAGCCAACCTTAACCAGCTACTCACAAGGTTGTCCGCCGATGCTTCCATGAGCAAACATTTCAGCAATACCATCATCGGAAACACCACTAACGCCATCGTGTATGGCCTATACGACTGCCGTGATGATGTTGCCGGATACTTCTGCCAGTTCTGTGTCACTACTGCTACCAGAGAGGCTCTCCAACGTTGCCCAAATCAATCTTCTGCTGTAATATGGTACAGCTATTGCATCCTGCGATACTCTAATAAGAACTATTTTGGGAAGGCGGATATGACCCCGATATGGTCTGGGGGAGGAGAGAAGAACGTGTCGGATCCGACGGAGGGAAAGAAGGGGGAAAGTTTCATAAGGAATCTGATCGAAGAAGCGACCGAGGAGGCAAAGAGGTTGAGCGCATGGGGAGAGTTTACTTTAGGTGGTGGAAGAACAAGGTATGCGTTGGTACAGTGCAGTAAAGACCTTTCCAACGTGGGTTGCAGGCAGTGTTTGGAGGCTATGTTGAATGAAGCTATTCAATGCTGTGAGCAGAAGCAAGATTGGCAAGTTGGGTCGACAACTTGTATGATCAAGTACACTAACTACATGTTTTACCAGTCACAATCTTCCCATACAGCCAATAAAGGAGTTGGCAAGTCAAAAGCCTTGATCATAAGCGCAAGTGTATTAATGATTGTGGCCGTACTATGTTTTTCTTTCTACCTATTCAGGCGGAGCAAGAGGAAAAGAGATGAAACGCCGTCGGAGAGCACTCCTGTAGTTTATGAGCTTTCTCAAACAGATAGTTCACTGAACACAGACCTTCCCACAATCCCTTTGCTTGTGATACAACAAAGCACCCAATACTTTTCAGAAGATTCCAAATTGGGAGAAGGTGGATTTGGTCTTGTTTATAAGGGAACACTACCAGATGGGAAGGATTTTGCTGTGAAAAGACTCTCTCAAACTTCAGGTCAAGGGTCACAGGAGTTCATGAATGAAGTGATATTCATAGCAAAATTGCAACATAGAAACCTTGTTAGACTCTTGGGATACTGCATGGAGGAAAATGAAAAGCTACTTGTATTAGAGTACCTGCCAAATTCTAGCCTTGACTCACACCTTTTCAATGATGAAAATAGAAAGAAACTAGATTGGACAAGAAGACTAAATGTTATTAATGGAATTGCAAGAGGAATTTTGTATCTGCATGAAGACTCCCGACTTAGAGTCATTCATAGAGATTTGAAACCTAGCAATGTCCTTTTGGATTATGAGATGAACCCTAAAATATCAGATTTTGGATTAGCAAGAGCTTTTGAAGGACTACAAAATCAACATGATACAAGACGAATAATGGGTACATATGGCTACATGGCTCCAGAATATGCTATGGAAGGATTATTTTCGGTGAAATCAGATGTTTTTAGTTTTGGAGTTATTCTACTAGAAATTATATGTGGAAAAAAGATTAGCAGTTTCTACGTCTCTGAACATGGTCAAAGTCTTCTATCTTATGCTTGGAATTTGTGGTGTGAAGGAAAATGTTTGGATCTAATGGATCCCATCCTAGAAGATTCGTATGTAGAAAATGAAGTTTTGAAGTGCATACATATTGCTTTGCTTTGTGTTCAAGAAGATGCAGCAGATAGGCCAACCATGTCCACTGTTGTCGTCATGCTTGCAAGTGACACGATGTCATTTCCCATGCCTAGTCGTCTTGCATTTTCAGTTGGAAGAAAGGTCACAGAAGATTTATCTACTTCAAAAGATTCTAAAGATGCTTCTATTAATGAGATGACCTTATCATCCATCAAACCAAGGTGA 1956 0.4105 MESSKPNIIPGFSMFFFIVISFIRTSTSQTSNYVGDDCHNKTPQTLTSSYKANLNQLLTRLSADASMSKHFSNTIIGNTTNAIVYGLYDCRDDVAGYFCQFCVTTATREALQRCPNQSSAVIWYSYCILRYSNKNYFGKADMTPIWSGGGEKNVSDPTEGKKGESFIRNLIEEATEEAKRLSAWGEFTLGGGRTRYALVQCSKDLSNVGCRQCLEAMLNEAIQCCEQKQDWQVGSTTCMIKYTNYMFYQSQSSHTANKGVGKSKALIISASVLMIVAVLCFSFYLFRRSKRKRDETPSESTPVVYELSQTDSSLNTDLPTIPLLVIQQSTQYFSEDSKLGEGGFGLVYKGTLPDGKDFAVKRLSQTSGQGSQEFMNEVIFIAKLQHRNLVRLLGYCMEENEKLLVLEYLPNSSLDSHLFNDENRKKLDWTRRLNVINGIARGILYLHEDSRLRVIHRDLKPSNVLLDYEMNPKISDFGLARAFEGLQNQHDTRRIMGTYGYMAPEYAMEGLFSVKSDVFSFGVILLEIICGKKISSFYVSEHGQSLLSYAWNLWCEGKCLDLMDPILEDSYVENEVLKCIHIALLCVQEDAADRPTMSTVVVMLASDTMSFPMPSRLAFSVGRKVTEDLSTSKDSKDASINEMTLSSIKPR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01701 651 ProSiteProfiles Gnk2-homologous domain profile. 142 247 IPR002902 -
Accr13g01701 651 FunFam Cysteine-rich receptor-like protein kinase 28 34 135 - -
Accr13g01701 651 CDD STKc_IRAK 339 604 - -
Accr13g01701 651 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 649 - -
Accr13g01701 651 ProSiteProfiles Gnk2-homologous domain profile. 32 136 IPR002902 -
Accr13g01701 651 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 291 408 - -
Accr13g01701 651 Gene3D Transferase(Phosphotransferase) domain 1 409 611 - -
Accr13g01701 651 Pfam Salt stress response/antifungal 38 133 IPR002902 -
Accr13g01701 651 Pfam Salt stress response/antifungal 165 245 IPR002902 -
Accr13g01701 651 Gene3D Phosphorylase Kinase; domain 1 299 408 - -
Accr13g01701 651 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Accr13g01701 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Accr13g01701 651 Pfam Protein kinase domain 334 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01701 651 SUPERFAMILY Protein kinase-like (PK-like) 317 620 IPR011009 -
Accr13g01701 651 FunFam Liguleless narrow1 409 612 - -
Accr13g01701 651 Gene3D - 30 136 IPR038408 -
Accr13g01701 651 Gene3D - 150 247 IPR038408 -
Accr13g01701 651 ProSiteProfiles Protein kinase domain profile. 333 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01701 651 SMART serkin_6 333 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01701 Accr-Chr13 32355292 32361920 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01701 12 637 Receptor kinase-like Gene Family AT4G05200 42.857 1.93e-171 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g01701 Pkinase 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01701 - - gmx:100795922 784.252