Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01700 ATGGCTCCAGAATATGCTATGGAAGGATTCTTTTCGGTGAAATCAGATGTTTTTAGTTTTGGAGTTATTCTACTAGAAATTTTATGTGGAAAAAAGATTAGCGGTTTCTACGTCTCTGAACATGGTCAAAGTCTTCTATCTTGTGCTTGGAATTTGTGGTGTGAAGGAAAATGTTTGGAACTAATGGATCCCATCCTAGAAGATTCATATGCAGAAAATGAAGTTTTGAAGTGCATACATATTGCTTTGCTTTGTGTTCAAGAAGATGCAGCAGATAGGCCAACCATGTCCACTATTGTCGTCATGCTAGCAAGTGACACAATGTCATTTCCCATGCCTAGTCGTCCTGCATTTTCAGTTGGAAGAAAGGTCACAGAAGACTTATCTACTTCAAAAGATTCTAAAGATGCTTCTATTAATGAGGTGACCTTATCATCCATCAAACCAAGGTGA 453 0.3797 MAPEYAMEGFFSVKSDVFSFGVILLEILCGKKISGFYVSEHGQSLLSCAWNLWCEGKCLELMDPILEDSYAENEVLKCIHIALLCVQEDAADRPTMSTIVVMLASDTMSFPMPSRPAFSVGRKVTEDLSTSKDSKDASINEVTLSSIKPR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01700 150 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 148 - -
Accr13g01700 150 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 1 108 - -
Accr13g01700 150 SUPERFAMILY Protein kinase-like (PK-like) 1 126 IPR011009 -
Accr13g01700 150 Pfam Domain of unknown function (DUF3403) 105 150 IPR021820 GO:0004674
Accr13g01700 150 Pfam Protein tyrosine and serine/threonine kinase 1 102 IPR001245 GO:0004672|GO:0006468
Accr13g01700 150 Gene3D Transferase(Phosphotransferase) domain 1 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01700 Accr-Chr13 32304435 32304993 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01700 1 150 Receptor kinase-like Gene Family AT4G23150 47.742 1.47e-46 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g01700 PK_Tyr_Ser-Thr 1.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01700 - - gmx:100796972 228.794