Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01698 ATGGAGTTGGATAATCCAGTTGGTAATTCTGAAAATTTTGAACCTGCTGTTAATTCATCATCAGTCAGAAGCGCCATGTCTATTCAGTCAAGGGGCTCCAGTAGGAATTCGACCCGAGAAGTAAATTTCGGGCCTCCGGCTGCAGATTCTGAAGCACTCAGCACGTCCCAAAAGGAAATCAGCGATGGGGATGCGAGGTTAGTGCATATAAATGATCCTGTGAAGACGAATGAGAGGGTTCGACTCTCAGGAAATTCGATTCGTACAGCGAAATACTCCATCATCACCTTTTTGCCCAAGAATTTATTTGAACAATTCCATAGAGTTGCTTACATTTACTTTCTTATAATTGCCATACTTAATCAGCTCCCTCAGATTGCCGTTTTTGGTATTGGGGTTTCTTTTTTGCCGTTAACCTTTGTCCTGGTAGTTTCTGCTGTGAAGGATGCATATGAGGACTGGAGGCGGCATCAGTCCGACAAAATTGAGAACAACAGGTTAGCATCAGTTATGGTTGATAGTCGTTTCCAAAAGAAAAAATATAAGGACATTAGAGTTGGCGAAATCGTTAAAATCCATGCAAATGAAACCATTCCTTGTGATATGGTATTGCTGTCAACAAGTGATCCTACGGGGGTTGCATTTGTTCAGACTACTAATTTAGATGGAGAGTCGAATTTGAAGACTCGGTATGCAAAATCTGAGACCCTATCACTGTTCCCTGAAAAGGAGAGCATTAATGGGTTCATTAAGTGTGAGAAACCGAATAGGAACATTTATGGGTTTCAGGGTAGCATGGAAATTGATGGAAAGCGATCCTCACTTGGACCATCCAATATTGTTCTCCGAGGCTGTGAAATCAAGAATACCAATTGGGCGATTGGTGTTGCTGTATATTGTGGCCAAGAAACTAAGGCTATGCTCAATAGCTCTGGGGCTCCATCAAAGAGGAGTCGGCTGGAGACTCGTATGAACAAGGAGATAATCTTGATCTCTTGCTTTCTTGTCACTTTGTGTACTGTTATCTCTGTTTGTACTGCTATTTGGTTAAAGCGCTACAAAGATGACTTAAATCTCTTGCCCTATTATCGAAAACTGGATGTTTCAAGTGGAAAAGCTAAAAGCTACAAGTATTCTGGATGGGGATTGGAAATACTGATTGCATTCCTCATGTCAGTTATAGTGTTCCAAGTCATGATTCCCATATCATTGTACATTTCCATGGAGCTTGTCCGGATTGGTCAGGCCTACTTCATGACAAGAGACACTAAACTGTATGATGAGGCATCAAATTCCAGATTTCAGTGTAAATCTTTAAATATAAATGAAGACTTGGGACAAATTAAATATATTTTCTCAGACAAAACTGGCACACTTACCGAGAACAAGATGGAATTTCAATGTGCAAGCATCTGGGGGGTTGATTATGGCTCTCAAAATGCTGATCTGGGGAATGAGCCTGTCTCAGTTGATGGAAATATATTGAGGCCTAAGGTGAAGGTGAAAGTTGATCCAGAGCTTTTGCAATTAACAAGAGGTGGATTAAAAAATAAGGAGGGAAAACATGTTTGTGAGTTCTTCCTTGTGTTGGCAGCCTGCAATACTATTGTGCCTCTTCTTGTCGACACATCTGATCCTGAAGTCAAATTGATTGATTACCAAGGGGAGTCACCGGATGAACGGGCATTGGCATATGGTGCGGCCGCCTATGGTTTTACACTCCTAGAACGAACTTCAGGCTATATAGTAATTGATATTCAAGGAGAAAGACAAAAGTTCAAAGTCTTGGGTTTGCATGAATTTGATAGTGACCGGAAGAGGATGTCTGTCATATTGGAGTTCCCTGACAATTCTGTGAAAGTATTTGTCAAAGGTGCTGATACATCAATGTTTAGTGTGATAGATAAATCACTAAGTATGGACATAATACGTGCAACTGAAACCCATCTTCACAATTATTCTTCTCTCGGTTTGAGAACCCTTGTTATCGGGGTGCGGGAATTAAATCCTTTAGAATTTGAGCAATGGCACTTTGCCTTTGAGGAGGCAAGCAATGCTCTGATTGGTAGGGCTGCTTTGCTCCGCAAGGTTTCCAGCAGTGTGGAAAACAATCTCTGCATATTGGGTGCATCTGCTATTGAAGATAAGCTGCAGCAAGGGGTACCTGAATCCATTGAATCTCTAAGGACAGCAGGTATCAAGGTATGGGTGTTGACTGGTGACAAACAAGAAACGGCCATATCAATTGCTTACTCCTCAAAGCTACTGACAGGCGATATGGCTCAAATTGTAATTAATAGCAACAATAGAGAGTCATGTAGAGGGCATTTACATGATGCCCTTGTAAAGTCTGACAAACTCATGGCCATGCCTGGGGGTGCTAACAATATTGGAGGAAGTACTGAACCTGTAGCAACTCAAATAGCATTAATCATTGATGGTACTAGCCTTGTTTATATTCTTGAAAGTGAAAACAGTGAACTTGAAGAACAGTTCTTTCAACTAGCATGTAAATGTTCAGTAGTTCTGTGCTGTCGAGTGGCTCCTCTACAGAAGGCTGGGATTGTTTCCCTTGTGAAGAAGAGGACTTCTGACATGACACTAGCCATTGGAGATGGTGCTAACGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTGGGCATCAGTGGACAGGAGGGTCGCCAAGCTGTAATGGCTTCAGATTATGCAATGGGACAATTTAGGTTCATAGTTCCTCTCTTATTGGTTCATGGCCACTGGAATTATCAACGGTTGGGTTACATGGTGCTATACAACTTGTACAGGAATGCTATCATTGTTCTTGTCCTATTTTGGTATGACCTGTTCACTGCCTTCACTTTGACAACTGCTATAACTGAATGGAGCAGTTTGTTATATTCTGTAGTTTACACAGCATTCCCAACTATTATTGTTGGTATTCTTGACAAAGATCTTAGTAAAAGGACTCTCCTGAAGCATCCACAGCTTTATGGAGCTGGGCAGAGAAATGAGGCCTACAATGAACATCTATTTTGGTTTACAATGGCTGATACTTTGTGGCAAAGTATTGTAGTGTTCTTTGTTCCTCTTTTCGCTTATTGGGGAAGCACCATCGACATATCAAGCATTGGAGATCTTTGGACTCTTTCAGTGGTTATTTTGGTTAATTTACACTTGGCCATGGATGTCATAAGGTGGGCTTGGGTTACTCATGCAGCCATTTGGGGTTCTGTCATTGCAACCTTCATTTCTGTCATGATCATTGATGCTATACCCACTTTTCCTGGTTACTGGGCCATCTTTCATGTTGCGGGAACACGTGTGTTCTGGTTATGTTTGCTCGGATCCATTGTAGGAGCTCTGCTTCCTCGATTTGTTATAAAGTTTGTGCATCAGTATTACTGTCCTAACGATATTCAAATTTCAAGAGAAGTCGAAAAAAAGTCTGTGAATACAACAAGAGTGGTTGGTGGTGGGCAGCTAGAAATGCTTCCTATCAGATGA 3507 0.4146 MELDNPVGNSENFEPAVNSSSVRSAMSIQSRGSSRNSTREVNFGPPAADSEALSTSQKEISDGDARLVHINDPVKTNERVRLSGNSIRTAKYSIITFLPKNLFEQFHRVAYIYFLIIAILNQLPQIAVFGIGVSFLPLTFVLVVSAVKDAYEDWRRHQSDKIENNRLASVMVDSRFQKKKYKDIRVGEIVKIHANETIPCDMVLLSTSDPTGVAFVQTTNLDGESNLKTRYAKSETLSLFPEKESINGFIKCEKPNRNIYGFQGSMEIDGKRSSLGPSNIVLRGCEIKNTNWAIGVAVYCGQETKAMLNSSGAPSKRSRLETRMNKEIILISCFLVTLCTVISVCTAIWLKRYKDDLNLLPYYRKLDVSSGKAKSYKYSGWGLEILIAFLMSVIVFQVMIPISLYISMELVRIGQAYFMTRDTKLYDEASNSRFQCKSLNINEDLGQIKYIFSDKTGTLTENKMEFQCASIWGVDYGSQNADLGNEPVSVDGNILRPKVKVKVDPELLQLTRGGLKNKEGKHVCEFFLVLAACNTIVPLLVDTSDPEVKLIDYQGESPDERALAYGAAAYGFTLLERTSGYIVIDIQGERQKFKVLGLHEFDSDRKRMSVILEFPDNSVKVFVKGADTSMFSVIDKSLSMDIIRATETHLHNYSSLGLRTLVIGVRELNPLEFEQWHFAFEEASNALIGRAALLRKVSSSVENNLCILGASAIEDKLQQGVPESIESLRTAGIKVWVLTGDKQETAISIAYSSKLLTGDMAQIVINSNNRESCRGHLHDALVKSDKLMAMPGGANNIGGSTEPVATQIALIIDGTSLVYILESENSELEEQFFQLACKCSVVLCCRVAPLQKAGIVSLVKKRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDYAMGQFRFIVPLLLVHGHWNYQRLGYMVLYNLYRNAIIVLVLFWYDLFTAFTLTTAITEWSSLLYSVVYTAFPTIIVGILDKDLSKRTLLKHPQLYGAGQRNEAYNEHLFWFTMADTLWQSIVVFFVPLFAYWGSTIDISSIGDLWTLSVVILVNLHLAMDVIRWAWVTHAAIWGSVIATFISVMIIDAIPTFPGYWAIFHVAGTRVFWLCLLGSIVGALLPRFVIKFVHQYYCPNDIQISREVEKKSVNTTRVVGGGQLEMLPIR 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01698 1168 PRINTS Sodium/potassium-transporting ATPase signature 947 967 - -
Accr13g01698 1168 PRINTS Sodium/potassium-transporting ATPase signature 445 466 - -
Accr13g01698 1168 Pfam Phospholipid-translocating ATPase N-terminal 68 130 IPR032631 -
Accr13g01698 1168 Pfam Phospholipid-translocating P-type ATPase C-terminal 898 1138 IPR032630 -
Accr13g01698 1168 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 458 720 IPR023299 GO:0000166
Accr13g01698 1168 FunFam Phospholipid-transporting ATPase 707 910 - -
Accr13g01698 1168 MobiDBLite consensus disorder prediction 1 59 - -
Accr13g01698 1168 NCBIfam phospholipid-translocating P-type ATPase 84 1145 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Accr13g01698 1168 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 59 1148 - -
Accr13g01698 1168 Pfam E1-E2 ATPase 168 409 - -
Accr13g01698 1168 Gene3D - 554 688 IPR023299 GO:0000166
Accr13g01698 1168 MobiDBLite consensus disorder prediction 11 59 - -
Accr13g01698 1168 FunFam Phospholipid-transporting ATPase 140 309 - -
Accr13g01698 1168 SFLD C1.7: P-type atpase like 436 921 - -
Accr13g01698 1168 FunFam Phospholipid-transporting ATPase 552 685 - -
Accr13g01698 1168 SFLD p-type atpase 436 921 IPR044492 -
Accr13g01698 1168 SUPERFAMILY Calcium ATPase, transmembrane domain M 85 1137 IPR023298 -
Accr13g01698 1168 SUPERFAMILY Calcium ATPase, transduction domain A 165 306 IPR008250 -
Accr13g01698 1168 ProSitePatterns E1-E2 ATPases phosphorylation site. 454 460 IPR018303 -
Accr13g01698 1168 NCBIfam HAD-IC family P-type ATPase 840 956 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr13g01698 1168 CDD P-type_ATPase_APLT_Dnf-like 84 1030 - -
Accr13g01698 1168 Gene3D - 704 910 IPR023214 -
Accr13g01698 1168 Gene3D - 137 309 - -
Accr13g01698 1168 Pfam Cation transport ATPase (P-type) 557 631 - -
Accr13g01698 1168 SUPERFAMILY HAD-like 439 910 IPR036412 -
Accr13g01698 1168 PRINTS P-type cation-transporting ATPase superfamily signature 749 759 - -
Accr13g01698 1168 PRINTS P-type cation-transporting ATPase superfamily signature 452 466 - -
Accr13g01698 1168 PRINTS P-type cation-transporting ATPase superfamily signature 870 889 - -
Accr13g01698 1168 FunFam Phospholipid-transporting ATPase IC 449 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01698 Accr-Chr13 32193101 32198799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01698 38 1148 Primary Pumps ATPases AT5G04930 68.700 0.0 1626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01698 K14802 - gmx:100784988 1762.66