Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01634 ATGGAGTTTGGAATTTCAAGCTCTAAACTTTTCTATCTTTTCATATTTGGATGTTTCGCTTTGAATGCTTCCACATATTATGGATCCAATGCTCAACTCATACCAGATGATGAAGTGAGAATTCTAAAAGCAATATCATCAAAGATAGCGAACTTGAATTGGAATGTGACCTCACGTTCTTGTATCGATGGAGGCTTCAAAAATAAGGCCATTGATATAGATAATTTCATCATAAGGAATGTAACATGCAATTGCAGTTTCTCAAGTGGAAAAGTTTGCCATGTTACAAATATCTACGTGACGGGTATCAATCTATCTGGAATTTTACCAAGTGAATTTGGGTACCTTACCCATTTACAAGAACTTGATTTGACATATAATAGTCTAAATGGATCAATCCCAAAGAGTTTTTCCAGACTCCCTCTTGTTGCATTACGCCTTACAGGCAACCCAATTAGTAGTCAAATTCCAACTGAAATTGGTGAAATTACAACCTTGGAGGATTTAGAGTTGGTAGATAATCTGTTGGAAGGAACTATTCCTTCTAGTTTCGGAAAATTGAAGCTGTTAAGCAAATTGGATCTTTCTGGAAATAATTTCTCCGGGGCGTTACCTGAAGGTTTTGGCAATCTAAAGAAACTAGAATATATTGCATTAGATGGGAGCAATATAACAGGAAACCTACAAGATTTTATTGGGAATTGGACCGAACTGACGACACTGTATTTACAAGGAACTTCTCTGCAAGGCCCCATTCCAACAACTATATCTCAATTGACAAATCTGACTGTGTTATATATATCTGATTTGCTTGGACCAGCAACAATGAGATTTCCTAATCTGAAGAATTTGACATCTTTGCAACAATTGGTGTTGAGAAATTGCTCCATAAATGATTTCATTCCAAGTTATATTGGTGAAATGGTGCACTTAGATACTCTAGATTTGAGCTTCAACAAATTGATTGGTGAAATTCCAAACAACATAAATGACTTGACCTCCCTAACGTACATGTTTCTAAATGAAAATTCTCTGAGCGGAAAAGTTCCTGAATGGATACTGCAAAACGAAGATGATTATTTCGATCTATCTTACAACAATTTTTCCGAGACTTCTGCGCCTAATTGTCAGTACAATAATGTAAACTTGGCTTCAAGCCTATCATCTTCTGCAAAAACCTCACATGCTTGCCTGAAGAGGGGCCTTCCTTGTGAAGGAAAACCCAAGTATCATTCGTTGTTCATCAATTGTGGAGGACCAGAAATTGAATATGACGGGAATAAATACGAAGGGGACACCAATCCTGGGAGTATCTCATCTTTTTTTCTTAGCGATGATAAATGGGCTTATAGTAGCACAGGAATATACTGGGGAAGATCTGATTATAAATACTTAGTAACAAACGAATTTTCTCTCAACATTAATGGTCCTGACTTCTACCAAACAGCTCGCCTTTCTCCTTTGTCTCTCAAATATCAAGGTCTCTGCATGATTAATGGAAATTACAACGTCAAGCTACACTTTGCTGAAATTATGTATTCTAATGACCGAAATCTCAGCGGCCTTGGAAGGCGTATATTTGATGTTTCTATTCAAGGCAGGAAATATTTGCGTGATTTCAACATTATAAAGGAAGCTGGTGGCGTTGGTAAGGGCATTGTCAAGGACTTTAACGTTGATGTCAATAATAACACCTTGGAGATTCATTTATATTGGGCTGGGAAAGGAACTTACTATGTTCCTGATAATGCTATAAATGGACCTCTTATATCTGCTATTTCAGTCAGCCCAAACTTCAAAATTGAACGGAATTCAGCTGGAGCCATTGCTGGAATTGTGATTGGATCATGCTTGTTCCTCATCATGCTAATAGTATTTGTCCTTCGAAGGATGGCTTTCCTAGGTGGCAAAGATTCAAAAGACAAACAACTTTCAGATCTAGAAACAGGGTATTTCTCTTTTAAACAAATCAAAGATGCCACTAATAACTTTGCCCCAGAAAATAAGATTGGTGAAGGAGGTTTTGGACCGGTGTACAAGGGTGTACTATCAAATGGTGTCATCATAGCGGTTAAGCAGCTTTCCTCCAAATCAAAGCAAGGGAATCGCGAATTTGTTAATGAAATTGGGATGATATCTGCGTTGCAACACCCAAACCTTGTGAAGCTGTATGGCTGTTGCATTGAAGGAAACCAGTTATTACTGATATATGAATATATGGAGAACAACAGTCTTGCTAACGCTCTTTTTCGTAGCCAAGGACCAAAGATACACTTGGATTGGCCTACAAGAATGAAAATATGTGTAGAGATAGCGAGAGGATTAGCTTATCTTCATGAGGAATCAAGGTTGAAAATTGTGCATAGAGATATCAAGGCAACAAATGTCTTACTCAGTAAAGACTTTAGTGCCAAGATCTCAGATTTTGGCTTAGCCAAGCTTGATGAAGAGAATACTCATATTAGCACAAGAATAGCAGGAACAATTGGATATATGGCTCCTGAATATGCAACACGAGGATACTTGACCGACAAAGCAGATGTTTATAGTTTTGGAGTCGTTGCTTTAGAAATTGTTAGTGGAAAAAGAAACACAAGTTACAGGCCAAATGAGGAATTTGTTTATCTTCTTGATTGGGCATATGTTCTTCAAGAGAAAGGAAGCCTTCTTGATCTGGTGGATCCAAGTCTTGGTTCAAGCTACTCCTCACAGGAAGCCATGAGAATGCTGGAGGTGGCACTCCTTTGCGCTAACCCATCTCATAGTCTGAGACCATCCATGTCCTCTGTTGTTTTCATGCTTGAAGGAAAGTTGCTGATCCAAGCTCCAATAATCAAGCCTCGGGAGAGCGACCAAGATGCGAGAGGCGAGGCCTTTGAGATCACATCATCTCAAGATAGCCATAGCCAAACCTTTAATTCTTCCACAAAATCACATGAAAATGTGGAGCAAAGTGTTGATGCAATGGATGGTCCATTGTCACGTGACAACCATAGCCAAACCTTTGCTTCTTTTGCATTCTCAGATGAAAGGGTGGAACAAGGAGTTGATGTAATGGATGGTCCTTCGACTAACTCCTTTATTTCCCTACCAAGTAAATATTTCTCTCCATCTAGTAGGCTTCTGAAGGATTCCAACTAG 3141 0.3862 MEFGISSSKLFYLFIFGCFALNASTYYGSNAQLIPDDEVRILKAISSKIANLNWNVTSRSCIDGGFKNKAIDIDNFIIRNVTCNCSFSSGKVCHVTNIYVTGINLSGILPSEFGYLTHLQELDLTYNSLNGSIPKSFSRLPLVALRLTGNPISSQIPTEIGEITTLEDLELVDNLLEGTIPSSFGKLKLLSKLDLSGNNFSGALPEGFGNLKKLEYIALDGSNITGNLQDFIGNWTELTTLYLQGTSLQGPIPTTISQLTNLTVLYISDLLGPATMRFPNLKNLTSLQQLVLRNCSINDFIPSYIGEMVHLDTLDLSFNKLIGEIPNNINDLTSLTYMFLNENSLSGKVPEWILQNEDDYFDLSYNNFSETSAPNCQYNNVNLASSLSSSAKTSHACLKRGLPCEGKPKYHSLFINCGGPEIEYDGNKYEGDTNPGSISSFFLSDDKWAYSSTGIYWGRSDYKYLVTNEFSLNINGPDFYQTARLSPLSLKYQGLCMINGNYNVKLHFAEIMYSNDRNLSGLGRRIFDVSIQGRKYLRDFNIIKEAGGVGKGIVKDFNVDVNNNTLEIHLYWAGKGTYYVPDNAINGPLISAISVSPNFKIERNSAGAIAGIVIGSCLFLIMLIVFVLRRMAFLGGKDSKDKQLSDLETGYFSFKQIKDATNNFAPENKIGEGGFGPVYKGVLSNGVIIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLANALFRSQGPKIHLDWPTRMKICVEIARGLAYLHEESRLKIVHRDIKATNVLLSKDFSAKISDFGLAKLDEENTHISTRIAGTIGYMAPEYATRGYLTDKADVYSFGVVALEIVSGKRNTSYRPNEEFVYLLDWAYVLQEKGSLLDLVDPSLGSSYSSQEAMRMLEVALLCANPSHSLRPSMSSVVFMLEGKLLIQAPIIKPRESDQDARGEAFEITSSQDSHSQTFNSSTKSHENVEQSVDAMDGPLSRDNHSQTFASFAFSDERVEQGVDVMDGPSTNSFISLPSKYFSPSSRLLKDSN 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01634 1046 Pfam Protein tyrosine and serine/threonine kinase 667 885 IPR001245 GO:0004672|GO:0006468
Accr13g01634 1046 MobiDBLite consensus disorder prediction 1019 1046 - -
Accr13g01634 1046 MobiDBLite consensus disorder prediction 960 983 - -
Accr13g01634 1046 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 635 739 - -
Accr13g01634 1046 Gene3D Ribonuclease Inhibitor 169 273 IPR032675 -
Accr13g01634 1046 Gene3D Ribonuclease Inhibitor 274 413 IPR032675 -
Accr13g01634 1046 ProSiteProfiles Protein kinase domain profile. 664 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01634 1046 SMART LRR_typ_2 116 140 IPR003591 -
Accr13g01634 1046 SMART LRR_typ_2 284 308 IPR003591 -
Accr13g01634 1046 SMART LRR_typ_2 332 356 IPR003591 -
Accr13g01634 1046 SMART LRR_typ_2 187 210 IPR003591 -
Accr13g01634 1046 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 410 598 - -
Accr13g01634 1046 CDD STKc_IRAK 670 936 - -
Accr13g01634 1046 SUPERFAMILY Protein kinase-like (PK-like) 647 935 IPR011009 -
Accr13g01634 1046 Gene3D Transferase(Phosphotransferase) domain 1 740 943 - -
Accr13g01634 1046 Gene3D - 414 598 - -
Accr13g01634 1046 Gene3D Phosphorylase Kinase; domain 1 632 739 - -
Accr13g01634 1046 SMART serkin_6 664 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01634 1046 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 974 - -
Accr13g01634 1046 MobiDBLite consensus disorder prediction 960 982 - -
Accr13g01634 1046 CDD TM_EGFR-like 603 630 - -
Accr13g01634 1046 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 279 371 - -
Accr13g01634 1046 FunFam Putative LRR receptor-like serine/threonine-protein kinase 740 946 - -
Accr13g01634 1046 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 139 228 - -
Accr13g01634 1046 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Accr13g01634 1046 Pfam Malectin domain 413 593 IPR021720 -
Accr13g01634 1046 MobiDBLite consensus disorder prediction 1016 1046 - -
Accr13g01634 1046 Gene3D Ribonuclease Inhibitor 42 165 IPR032675 -
Accr13g01634 1046 SUPERFAMILY RNI-like 98 370 - -
Accr13g01634 1046 Pfam Leucine rich repeat 94 152 IPR001611 GO:0005515
Accr13g01634 1046 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01634 Accr-Chr13 30174298 30200077 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01634 1 992 Receptor kinase-like Gene Family AT1G53440 55.611 0.0 1084
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g01634 PK_Tyr_Ser-Thr 6.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01634 - - gmx:121173337 1229.54