Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01598 ATGGATGCCTCATCCAGTACATGTGAGATAGTGGAATCAAGAGAAGAGATTATTTCTGAGTTCAGAATGGATGAAAAAGCTGAGAGTAGTTGTGCCCACAGAGCAGGGAAAAAGTATTCTGTAGAGGATGATATTGATCGCCTCTTCCAAGCTATTGACTTCAAAAATTCAGCTAGAGGTTCTAATACACCACGTTCTCAAAAGAGTGCTCTTAAAAGGCCAATAAAAGTCAGTTCGTCTCAGGCGTCAGGAATTGGGATTGCAGAGCCTGTAAGTTTAAAGCAGGCACTTAGAGGACTTTGCATATCTCAGGCATCAGAGATGGCTGCTTTGAAGCGACTATCAAAGCCGTCCAGTTCATCTAGAGCATCTGAGGCAGGAACTATTAAGAAGCTGTATACAGCAGTGGTAGATGAGGGGAAAGGGAACTTGGTGGAAATCTCCCTTGTGCCTGAGATATCTGCACCTTCTGGTAAAATGCATAGGGAAGATAAGTCAAGTTCAAGTGCTGATCATTCTACTCATTTTGTTGATGTGACAAACCCAAAAACAGTCACAACCAGGGTAGCATCCCGGGATCAGATTGTTCCTCTTCAACCAGAAGGTGGAAGTGAGAAGTTAGTTTCAGTTGCCGGAAAACCTGTACTTCCAAATCCATCCACAGTTGATTATGGAAGTGAGGAAATATCTAAGGTCAAGATTGTCTCTGCTTCCTCAAGCAAAGCTTCCCACTGCTCTACAATGCTTGATAAGGGGCAGGAAGTAGACTTACATTCTGATACTAATCAACCAAGCTCTAGTACGAGCAGTGGAGTGGAGAAATCCACAAGCAGTACTACATGTTTGGCAAAGCCAATGTTTAGGAACATGAGCTTCCTTAGGAAAAAAGTAAAGCAAGAATTATGTTCTACCTCGAGTGGCTCCACACTATGTACCAGAAAAGTTGACAATGACTTGGATCCTAGTACGAGTAATTTGAACAAGGAGACTGATAAATATAATTTGAAGCATGAAATAAAAGAAAATGATAAATTGTCTCCCAGCAGTTCAAATCACAGCGTTGAAGTAAATTCAAATATTGTGGGTGCAGATTCAATGAAAACTGGTTTCAGTTTGAATTGCAGTAAGAAAACTAAATTTCTAGTAACAAAAATTGATGAAAAATCAAGATCAAAAGAAAAGGGTGAATTTTCCCAGAGCTCAAAAAGCAGCATTGGTGAGTATAGTACCAGCACAACGACAAGCACTAGTGAAGAGAGCAATCTGAGTGGTTCTAGCCGCAGTGGCCACAGGCCTCACATGTCGAAACACTTGAGATGGGAAGCTGTTCGTGCTATTCAGCAGCAGCATGGGAACTTAAGTTTGAAGCACTTCAAACTGCTAAGGAGGCTAGGTTGTGGGGACATTGGAACTGTTTATCTTGCAGAACTAATTGGTACAAGCTGTCTTTTTGCTTTGAAAGTGATGGATAATGAGTTTTTGGCCAACCGGAAGAAAAATTTCAGGGCCCAAACTGAGAGAGAGATCCTGCAGATGTTGGATCATCCTTTTCTTCCTACACTTTATGCGTGTATTACTACTGATAAGCTCTCTTGCTTGGTTATGGAGTATTGCCCAGGTGGAGATCTACATGTGCTGCGCCAGAGGCAACCATATAGGAGTTTCTCAGAACAAGCAACCAGGTTTTATGTTGCTGAAGTTCTTCTTGCCCTGGAGTATTTGCACATGCTAGGAGTGATATATCGAGACCTGAAGCCTGAAAATATCCTTGTTCGAGAAGATGGCCACATTATGTTGACAGATTTTGACTTATCACTTAGGTGTTCTGTGAATCCAACGTTAGTCAAGTCATCTTCTCCGGATGTGGATTCAACAAAAAAGATGTCCAGTCCTTGTGCAGAGGCTAGCTGCATACACCCTTTCTGTCTACAACCTGATTGGCAAGTGTCCTGTTTCACTCCTATTCTTATATCTGCTGGAGCGAAATCTCGAAAGATGAAGTCTGAGGCTGCCCAGGTTGGTCCCCTGCCACAACTCGTTGTTGAGCCAACCAGTGCCCGCTCTAACTCATTCGTTGGTACCTACGAATACCTTGCTCCAGAGATCATCAAAGGTGAGGGCCATGGGAGTGCTGTGGATTGGTGGACTTATGGTATATTTTTATTTGAGCTTTTGTATGGCAAGACTCCCTTTAAAGGAGCTGGAAATGAGGAAACACTATCCAATGTTGTGTCACAAAGCCTCAAGTTCCCAGATGCTCCTATTGTCAGTTTTCATGCGAGAGATCTGATACGTGGATTGTTGATAAAAGACCCGGAGAATCGGTTAGGTTCTGTAAAAGGCGCCGCAGAGATAAAACAACACCCTTTCTTTGAAGGCCTAAACTGGGCTTTGATAAGATGTGCAGCACCACCTGAGCTGCCCAGGTTTCGTGATTTTGGAAGTTGTGTTCCTTCCATGGCTTCACAGAAGGAGAATGCGAATGATTTAGAGGATACAGAAGATTGTGAGGAGTTTGAGCTGTTTTAG 2529 0.4282 MDASSSTCEIVESREEIISEFRMDEKAESSCAHRAGKKYSVEDDIDRLFQAIDFKNSARGSNTPRSQKSALKRPIKVSSSQASGIGIAEPVSLKQALRGLCISQASEMAALKRLSKPSSSSRASEAGTIKKLYTAVVDEGKGNLVEISLVPEISAPSGKMHREDKSSSSADHSTHFVDVTNPKTVTTRVASRDQIVPLQPEGGSEKLVSVAGKPVLPNPSTVDYGSEEISKVKIVSASSSKASHCSTMLDKGQEVDLHSDTNQPSSSTSSGVEKSTSSTTCLAKPMFRNMSFLRKKVKQELCSTSSGSTLCTRKVDNDLDPSTSNLNKETDKYNLKHEIKENDKLSPSSSNHSVEVNSNIVGADSMKTGFSLNCSKKTKFLVTKIDEKSRSKEKGEFSQSSKSSIGEYSTSTTTSTSEESNLSGSSRSGHRPHMSKHLRWEAVRAIQQQHGNLSLKHFKLLRRLGCGDIGTVYLAELIGTSCLFALKVMDNEFLANRKKNFRAQTEREILQMLDHPFLPTLYACITTDKLSCLVMEYCPGGDLHVLRQRQPYRSFSEQATRFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVNPTLVKSSSPDVDSTKKMSSPCAEASCIHPFCLQPDWQVSCFTPILISAGAKSRKMKSEAAQVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTYGIFLFELLYGKTPFKGAGNEETLSNVVSQSLKFPDAPIVSFHARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPRFRDFGSCVPSMASQKENANDLEDTEDCEEFELF 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01598 842 MobiDBLite consensus disorder prediction 315 334 - -
Accr13g01598 842 MobiDBLite consensus disorder prediction 258 279 - -
Accr13g01598 842 MobiDBLite consensus disorder prediction 315 329 - -
Accr13g01598 842 CDD STKc_phototropin_like 456 814 - -
Accr13g01598 842 SMART serkin_6 458 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01598 842 MobiDBLite consensus disorder prediction 56 75 - -
Accr13g01598 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 579 591 IPR008271 GO:0004672|GO:0006468
Accr13g01598 842 MobiDBLite consensus disorder prediction 391 434 - -
Accr13g01598 842 Gene3D Transferase(Phosphotransferase) domain 1 538 607 - -
Accr13g01598 842 MobiDBLite consensus disorder prediction 254 279 - -
Accr13g01598 842 Pfam Protein kinase domain 688 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01598 842 Pfam Protein kinase domain 459 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01598 842 FunFam serine/threonine-protein kinase D6PK-like 686 809 - -
Accr13g01598 842 FunFam serine/threonine-protein kinase D6PK-like 542 609 - -
Accr13g01598 842 Gene3D Phosphorylase Kinase; domain 1 456 537 - -
Accr13g01598 842 PANTHER FLIPPASE KINASE 1-RELATED 273 810 - -
Accr13g01598 842 Gene3D Transferase(Phosphotransferase) domain 1 685 808 - -
Accr13g01598 842 SUPERFAMILY Protein kinase-like (PK-like) 431 810 IPR011009 -
Accr13g01598 842 MobiDBLite consensus disorder prediction 398 429 - -
Accr13g01598 842 ProSiteProfiles Protein kinase domain profile. 458 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01598 842 FunFam Serine/threonine-protein kinase D6PK-like 456 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01598 Accr-Chr13 28833331 28837178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01598 343 842 AGC Kinase Gene Family AT3G52890 63.672 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Accr13g01598 Pkinase 3.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01598 - - gmx:100789339 1228.77