Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01597 ATGATTCTCCGTTGCTCATCTTATCCCAAGCTTAGAGGTTGTTGGAAGGAAATTGCATCGGCTTTACCTCACCGACCTCTGGAAAGTGTATATCATCGTGGTCATTTTTTGTTTGAAAGGGATGATTCTCGTAAATGGACCCCTAAAGAGTTAGAAATTATACGGAACTTCCATGAAAAGCATGGACCTAACTGGAAAATGTTGGCTGATGCAATGGGGAAACATCGGTTTCATGTAAAGGATGCATGGCGTAGGATAAAATTAGGAGATGTAAAGAAAGGACACTGGTCACAAGATGAGTATCAAAAGTTATTTAATTTGGTAAATGCTGATCTAAGTATGAGGGCTTTAGAGGAGACTAGAAAATATAAACATGGTATGTTGCAAGATAATATATGTTGGGAGGCAATTGGTAATAAGGTGGCAACTAGAACCAGTCAACTTTGCTGTATGAAGTGGTATGAAAAATTAACATCTCCTATGGTTGCTGAAGGTGAATGGGCTGATACCGATGACTATTGCCTTCTTAATGCTTTATATACATTGGATGACTGCTCAATGGAAGATGTGGAATGGGATCATTTGCTTGAGCATAGGTCTGGTAATGTATGTAGAAAACGATGGAATCAAATGGTTCAGCATATTGGAGAGCACGGGATTAAGTCATTTTCTGAGCAAGTGGGAGTTCTGTCTGAGAGATATTGTCCTGATTTGGCGGAAGCAAGAGAAGCCTTCAATAGCAAGCCTGTGGTCCCTTGA 759 0.4005 MILRCSSYPKLRGCWKEIASALPHRPLESVYHRGHFLFERDDSRKWTPKELEIIRNFHEKHGPNWKMLADAMGKHRFHVKDAWRRIKLGDVKKGHWSQDEYQKLFNLVNADLSMRALEETRKYKHGMLQDNICWEAIGNKVATRTSQLCCMKWYEKLTSPMVAEGEWADTDDYCLLNALYTLDDCSMEDVEWDHLLEHRSGNVCRKRWNQMVQHIGEHGIKSFSEQVGVLSERYCPDLAEAREAFNSKPVVP 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01597 252 SUPERFAMILY Homeodomain-like 44 104 IPR009057 -
Accr13g01597 252 Gene3D - 47 85 - -
Accr13g01597 252 ProSiteProfiles Myb-like domain profile. 45 87 IPR001005 -
Accr13g01597 252 Pfam Myb-like DNA-binding domain 46 104 - -
Accr13g01597 252 ProSiteProfiles Myb-like domain profile. 88 157 IPR001005 -
Accr13g01597 252 PANTHER GB|AAC33480.1 1 252 - -
Accr13g01597 252 SUPERFAMILY Homeodomain-like 137 215 IPR009057 -
Accr13g01597 252 SMART sant 92 159 IPR001005 -
Accr13g01597 252 SMART sant 42 89 IPR001005 -
Accr13g01597 252 SMART sant 163 214 IPR001005 -
Accr13g01597 252 CDD SANT 45 74 IPR001005 -
Accr13g01597 252 Gene3D - 86 161 - -
Accr13g01597 252 ProSiteProfiles Myb-like domain profile. 159 212 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01597 Accr-Chr13 28772835 28773593 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01597 46 213 MYB Transcription Factor Family AT5G02320 23.977 5.80e-06 45.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr13g01597 Myb_DNA-bind_6 1.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01597 - - pcin:129298814 435.261