Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01582 ATGTTGTTTCTAAATTCCTTTGTGCTATTTATCCTTCTCATTATGGTTCTTCCGTTACAGTGTTCATCTTCATCCTCCGAAAATGTTTTCTTCCTATCGGTGGAGAATCCGGATAACCTTATAAAATCAAGTAACAAAGTGTTTACTGCTGGATTTTATAATGTTGGCGAGAATGCCTTTGTCTTTGCCATCTGGTTCACTGAACCTCAAGGCAAAAACTTGACCCCCATTTGGATGGCAAATCGTGACGGCGCAGTCAACGGGATAGGCTCAACGCTTACCCTCCATGCTACTGGTAATCTTGTGTTAAATGACGCAGGTCACTTTGATGTTTGGGCCACCAACACCACATCCACCACCTCTCCAAAATTGGTTCTCAATGATAATGGTAATCTTAATCTTACTGAATCTAACGGCAAAGTCCTGTGGCAAAGTTTTGACGATCCAACTGATACACTTGTCCCCGAACAACCTCTCACTAGATTCACAAAGCTCGTCTCGTCCAGAAGTCAAACTAACTGCTCTTCTGGTTTTTATAAGTTGTTTTTCGATTATGATAATGTTCTTCGTCTTCTCTATGATGGTCTTGATGTTTCAAGTATCTACTGGCCAGATCCTGGCCTCGTTAGCTGGCATGCTGGAAGGTCCATATACAATGCAAGTCGCACTGCAATTCTAGATTCATATGGTAATTTTAGTTCAACTGATGACTTTACTTTCAAGACATCAGATTATGGCCCTGTGCTTCAGAGAAGATTGACTATTGATTATGATGGCAATCTTCGAGTCTACAGTCGAAAAGGCAGGGGAGAGAAATGGAGTATTTCATGGCAAGCCGAATCACAACCTTGCAGGATCCATGGCATCTGTGGAGCCAACAGTGTTTGCACCTATGATCGTTATTCTGGTAGAAAATGCTCTTGTCTTCCCGGTTACAAGGTGAAGAATGTACGTGACTGGTCTTTTGGGTGCGAGCCTAAATTCAATTTGTCTTGTGGCTCAACAGAGTCTCGCTTTTTGCATATAAAAAATTCTGAGTTCTATGGCTATGACCAGGGATTCTTTCAAAATCATACTTATAAACAATGTGTGGACGCATGCTTGGAATTGTGTGGCTGCAAAGGATTTCAATATACTTGGGATCCTGGAGGTAGCTATTATAATTGTTACCGAAAGACACGTTTGCTCAACGGGTATGTTTCCCCTGGTTTTAGGGGATCAATTTACTTGAGACTACCTAAATCTAGCCCCTTCACTTTTGAAGAATCTACTGCGAAGAAGTGTGGTAGTGTTAACTCTACAATGCTTGAAAGATTGTATAGGTTAAGACCTGGCAGACTTTTAATAAAGGTGCTATTTTGGTTAGTATTGGCAATTGGGTCCTTTGAAGTTGGGAGCATCTTTCTAGTTTGGTGTCTATTAAGGACACAAGGAAAGTCGAGTACAGATCAACACAACTATCATCTTGCTGCTACTGGATTTAGAAACTATAACTATTCTGAGTTGAAAGAGGCAACAAAAGGGTTCAGTGAAGAGATTGGCCGGGGAGCTGGGGGAATTGTATACAAGGGTGTATTGGGAGATCAACGAGTTGCAGCAATCAAGAGACTCAACGAAGCTGGGCAAGATGAAAGTGAATTTTTAGCCGAAGTAAACATAATTGGAAGGCTTAATCACATGAACCTAATCGACATGTGGGGTTATTGTGCAGAAGGTAAGCACAGATTGCTAGTGTATGAGTACATGGAGAATGGTTCTTTGGGAGAAAATCTGGTGTCCAATAGCTCCTCACTCGATTGGAAAAAGCGGTACAACATTGCTCTGGGCATGGCCAGAGGTCTAGCATATCTGCATGAAGAATGCTTGGAGTGGATTTTGCATTGTGATATAAAGCCTCAAAACATACTTCTAGATTCAGAATATCAACCTAAGGTGGCAGATTTTGGGTTGTCTAAATTAGTGAATAGAAATGATGCCAACAACTCAGGCTTCTCAAGGATCAGAGGAACTAGAGGTTACATGGCACCTGAGTGGGTGTTCAATTTGCCAATTACGTCTAAGGTAGATGTGTATAGCTATGGAATTGTTGTGTTGGAGATGATAACGGGAAAAGGCCAAGTGGGGTCCCACATGGTGGATGGGGTAGAGTCGCATCACGGCAGGCTGGTGACATGGGTGAGGGAGAAAAAGAATAATAGAGGAAATGGAACAACGTCGTCGTGGGTGGAACAAATCATTGATCCTACGGTTGAGGGAAATTATGAGATTGGGAAGATGGAGATGCTGGCTAGGGTGGCTTTGGATTGTGTTGAGGAAGCCAGAGATGCAAGACCAACGATGAGTCAAGTAGTGGAGATGCTTCAGGGTCAAGAAACCGATTCTCAGTCATGGTAA 2394 0.4236 MLFLNSFVLFILLIMVLPLQCSSSSSENVFFLSVENPDNLIKSSNKVFTAGFYNVGENAFVFAIWFTEPQGKNLTPIWMANRDGAVNGIGSTLTLHATGNLVLNDAGHFDVWATNTTSTTSPKLVLNDNGNLNLTESNGKVLWQSFDDPTDTLVPEQPLTRFTKLVSSRSQTNCSSGFYKLFFDYDNVLRLLYDGLDVSSIYWPDPGLVSWHAGRSIYNASRTAILDSYGNFSSTDDFTFKTSDYGPVLQRRLTIDYDGNLRVYSRKGRGEKWSISWQAESQPCRIHGICGANSVCTYDRYSGRKCSCLPGYKVKNVRDWSFGCEPKFNLSCGSTESRFLHIKNSEFYGYDQGFFQNHTYKQCVDACLELCGCKGFQYTWDPGGSYYNCYRKTRLLNGYVSPGFRGSIYLRLPKSSPFTFEESTAKKCGSVNSTMLERLYRLRPGRLLIKVLFWLVLAIGSFEVGSIFLVWCLLRTQGKSSTDQHNYHLAATGFRNYNYSELKEATKGFSEEIGRGAGGIVYKGVLGDQRVAAIKRLNEAGQDESEFLAEVNIIGRLNHMNLIDMWGYCAEGKHRLLVYEYMENGSLGENLVSNSSSLDWKKRYNIALGMARGLAYLHEECLEWILHCDIKPQNILLDSEYQPKVADFGLSKLVNRNDANNSGFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGKGQVGSHMVDGVESHHGRLVTWVREKKNNRGNGTTSSWVEQIIDPTVEGNYEIGKMEMLARVALDCVEEARDARPTMSQVVEMLQGQETDSQSW 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01582 797 ProSiteProfiles PAN/Apple domain profile. 332 413 IPR003609 -
Accr13g01582 797 Pfam Protein kinase domain 510 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01582 797 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Accr13g01582 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Accr13g01582 797 PIRSF SRK 1 796 IPR024171 GO:0004674
Accr13g01582 797 CDD EGF 283 312 - -
Accr13g01582 797 SMART serkin_6 507 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01582 797 Gene3D Phosphorylase Kinase; domain 1 473 581 - -
Accr13g01582 797 CDD PAN_AP_plant 328 413 - -
Accr13g01582 797 CDD B_lectin 43 149 IPR001480 -
Accr13g01582 797 CDD STKc_IRAK 513 789 - -
Accr13g01582 797 Pfam S-locus glycoprotein domain 238 315 IPR000858 GO:0048544
Accr13g01582 797 ProSiteProfiles Protein kinase domain profile. 507 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01582 797 FunFam S-receptor-like serine/threonine-protein kinase 476 581 - -
Accr13g01582 797 FunFam Serine/threonine-protein kinase 582 795 - -
Accr13g01582 797 Gene3D Transferase(Phosphotransferase) domain 1 582 796 - -
Accr13g01582 797 Pfam D-mannose binding lectin 75 161 IPR001480 -
Accr13g01582 797 SMART blect_4 32 149 IPR001480 -
Accr13g01582 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 205 IPR036426 -
Accr13g01582 797 PANTHER OS07G0415500 PROTEIN 5 793 - -
Accr13g01582 797 ProSitePatterns Protein kinases ATP-binding region signature. 513 535 IPR017441 GO:0005524
Accr13g01582 797 SUPERFAMILY Protein kinase-like (PK-like) 483 788 IPR011009 -
Accr13g01582 797 Gene3D - 33 148 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01582 Accr-Chr13 27668473 27670866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01582 497 791 Trihelix Transcription Factor Family AT5G38560 42.475 3.76e-66 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr13g01582 Pkinase 2.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01582 - - jre:108987254 993.03