Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01579 ATGGTGTGTCCGACGACGAGGCAGAGAAGTGTGCCGGAAGATTACAGATTCTGTCCGACCGAGCAAAAGCTCGTCGGTCACTACCTCCGCCACAAATTGATGGATCCTGATGATTCCATTTGTAAAACCATCCCTGAGATTGACGTTTGGGAGAGGGAACCTTGGGAAATACCAAAATTGGCTGCTGTCGCGTTTCCGGAGATGGAAGAAGATGACCGGGAATGCTATTTCTTCCGTAAATGCGGTTACGGTGCTCGATTTAATAGGAAAACAAGAGCTGGCTCATGGAAAGTCACCGGTGAAGACAAAGTAATCAAGGCCCGTGACACCGAGAATGTAATTGGGAAGATGAAAATTCTAGTATATCACGCAACCTGTGCTCCTGGTCGTACGATCCAACGCAATTGCGCCGATGAGGGATTGGCAGAGAGGGTGCTGAGGGGAGGAACAGGACCCGATTGGAAATGGGTCATCCATGAATATCACTATGTCGCTGACGACGTCAAGATTCCTCCGGGAAACGGAACCTATGTAGTATGTAAACTAATTAAGAAAGAAGCAGATTTCTCTGTCCTTTCAAAGAAACATTATTTATCAAATAAGGACACTATAGACTCGCTGATTGAACACTACCTTAAGAAGAAGGGCTAA 651 0.4624 MVCPTTRQRSVPEDYRFCPTEQKLVGHYLRHKLMDPDDSICKTIPEIDVWEREPWEIPKLAAVAFPEMEEDDRECYFFRKCGYGARFNRKTRAGSWKVTGEDKVIKARDTENVIGKMKILVYHATCAPGRTIQRNCADEGLAERVLRGGTGPDWKWVIHEYHYVADDVKIPPGNGTYVVCKLIKKEADFSVLSKKHYLSNKDTIDSLIEHYLKKKG 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01579 216 ProSiteProfiles NAC domain profile. 11 185 IPR003441 GO:0003677|GO:0006355
Accr13g01579 216 SUPERFAMILY NAC domain 8 185 IPR036093 GO:0003677|GO:0006355
Accr13g01579 216 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 193 - -
Accr13g01579 216 Pfam No apical meristem (NAM) protein 12 162 IPR003441 GO:0003677|GO:0006355
Accr13g01579 216 Gene3D NAC domain 20 189 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01579 Accr-Chr13 27611056 27612089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01579 10 186 NAC Transcription Factor Family AT3G49530 37.363 1.56e-27 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr13g01579 NAM 3.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01579 - - pcin:129322017 136.732