Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01570 ATGGCATCATCAATCATTGTTAAGCTATTCTTTTCCCTCTCTTTATTTTCTTCACTTCTATCAATATCATCATCTTCTTCTTCTTCTTCGTCTTTAGATTTTTGGTGCAACCAAACTCCTCACTCAGATGAATGCAAACACCACATGAGCCAAAGTCACCAACGGTTCAGACCGAACCATCCGTCTGAATTCAAGAAAATGCTGGTTCAATTAGCACTAGACCAAGCCCAAGCCATGCATAAGAAAGCTCAAGAATATGGCCCTAAATGTGTCACCAAGATGCAGAAATGTGTATTCAGTGATTGTTTAAAGCTTTACGACAATACCATCTTCCATCTAAACCGGACGCTTCAAGCCCTACAGACAAATTCTTGCTCTCTATCAGATGCACAAACATGGCTCAGTACTGCCCTCACAAACATCGAAACTTGCCGGAGGGGCGCGTTGCAGCTTAGAGTTGGAGAGTTTACAGCTCAAAATAATGTGAGGAACAACGTTAGAAAGATGATAAGCAACGTGCTGGCTGTAAATGGCAAATTCCTGAAGCAAGAGAATTACACAGAGGAAGAGATTAAAGCACATGGGTTTCCAAGTTGGTTTTCTCGGCTCGAAAGGAGGTTGTTAAGTTTAAAGCCATCTTCAGTCAAGGCAAATCTCGTGGTAGCTCAAGATGGGACGGGCCAATCCAAGACGGTGCAAGCCGCCATTGATGTAGCATCAAGGAGAAAAGTGAAGAATAGGTTTGTGATAAGAGTGAAGAAAGGGATTTATGAAGAGAATATTGAAGTTGATAAGGATAATGAAAACCTCATGATTATTGGAGATGGAATGACACTCACCATTATAACTGGTAGTAAGAGTGTCAAAGATGGAATTACTCCCTCTATGTCTGCGACAGCAGGTATAGATGGTGCTCACTTCTTTGCACGAGACATCACTTTTAGAAACATGGCTGGTCCTGAAAAAGGTCAAGCTGTGGCGCTCCGATCAGCCTCCGATCTGTCTGTCTTCTATCGGTGTTCCATTGAAGGCTATCAAGATACTTTAATGGCTGCTTCACAACGCCAATTCTACAGAGATTGTAGAATTTTAGGCACAGTGGATTTCATTTGGGGAAATGCTGCAGTTGTTCTACAAAACTGCAGAATTCTCGTAAGAAAGCCACTTCAAGGACAAGCAATCATGATCACCGCCCAAGGACGAGACGACCCGTTTCAAAACACTGGGATATCAATAATCAATTCTCAAATTCAAGCAGCGCCGGATTTCAGAAAGGTTTATCACTCATATGAAACCTATTTGGGTCGGCCATGGCAGCAATATGCTCCAGTTGTTGTCATGAAAACTTATATTGAAGGCTTGGTAAATCCATTGGGATGGTCTCCATGGGACAATAGTGCCGTTGGTGAAGATACATGTTACGTTGGGGAATATATGAACTATGGGGCTGGTTCATCTACAAAAAGTAGAGTAAAATGGCCTGGCTTTCATGTCATTACTAATCCAAATGAGGCAAACCAGTTTAGTGTTGTTAGCTTCCTTGCTGGTGGCATATGGTTGCCTCGCACAGGGGTCCCTTTTACTATTGGTGTCAATTAA 1599 0.4234 MASSIIVKLFFSLSLFSSLLSISSSSSSSSSLDFWCNQTPHSDECKHHMSQSHQRFRPNHPSEFKKMLVQLALDQAQAMHKKAQEYGPKCVTKMQKCVFSDCLKLYDNTIFHLNRTLQALQTNSCSLSDAQTWLSTALTNIETCRRGALQLRVGEFTAQNNVRNNVRKMISNVLAVNGKFLKQENYTEEEIKAHGFPSWFSRLERRLLSLKPSSVKANLVVAQDGTGQSKTVQAAIDVASRRKVKNRFVIRVKKGIYEENIEVDKDNENLMIIGDGMTLTIITGSKSVKDGITPSMSATAGIDGAHFFARDITFRNMAGPEKGQAVALRSASDLSVFYRCSIEGYQDTLMAASQRQFYRDCRILGTVDFIWGNAAVVLQNCRILVRKPLQGQAIMITAQGRDDPFQNTGISIINSQIQAAPDFRKVYHSYETYLGRPWQQYAPVVVMKTYIEGLVNPLGWSPWDNSAVGEDTCYVGEYMNYGAGSSTKSRVKWPGFHVITNPNEANQFSVVSFLAGGIWLPRTGVPFTIGVN 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01570 532 SMART PMEI_2 27 176 IPR006501 GO:0004857
Accr13g01570 532 FunFam Pectinesterase 212 531 - -
Accr13g01570 532 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 180 IPR035513 -
Accr13g01570 532 Gene3D - 212 531 IPR012334 -
Accr13g01570 532 PANTHER PECTINESTERASE 19 521 - -
Accr13g01570 532 NCBIfam pectinesterase inhibitor domain 5 176 IPR006501 GO:0004857
Accr13g01570 532 Pfam Pectinesterase 218 516 IPR000070 GO:0030599|GO:0042545
Accr13g01570 532 CDD PMEI-like_3 35 182 - -
Accr13g01570 532 Pfam Plant invertase/pectin methylesterase inhibitor 34 175 IPR006501 GO:0004857
Accr13g01570 532 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 181 IPR035513 -
Accr13g01570 532 SUPERFAMILY Pectin lyase-like 215 530 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01570 Accr-Chr13 27378971 27380914 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01570 25 528 Carbohydrate Esterase AT5G51500 55.294 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01570 K01051 - gmx:100807908 622.083