Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01561 ATGCAGAAATGTGTATTCAGTGATTGTTTAAAGCTCTATGACAATACCATCTTCCATCTTAACCGAACCCTTCATGGCCTACACATATCTTCTTGTTCTCTATCAGACGCACAAACATGGCTCAGCACTTCGCTCACAAACATCGAAACTTGCCGGAGCGTCGCATTGCAGCTCGGAGTCGGAGAGTTTACAACTCAAAATAATGTGAGCGACAACGTTAGAAAGATGATAAGCAATGTGTTGGCCGTCAACGGGAAATTAATGAAGCAAGAGAATTATACAGAAGAAGAGATCAAAGCTCATGGTTTTCCGAGTCGGTTTTCTCTGCACGACAGGAGGTTGTTGAGTTTGAAGCCATCTTCTGTGAAGGAAAATCTTGTGGTGGCTCAAGATGGGACGGGGCATTTTAAGACGGTGCAAGCCGCCATTGATGCAGATTCAAGGAGAAAAGTGAAGACGAGGTTTGTGATAAGAGTGAAGAAAGGGATTTATGAAGAGAATATTGAAGTTGATACGGATAATGAAAATCTCATGATTATTGGTGATGGAATGAGACTTACCATTATAACTGGTAATAAGAGTGTCAAAGATGGAATTACTCCCTCTATGTCTGCAACTGCAGGTGTCGATGGTGCTCACTTCATTGCACGAGACATAACTTTTAGAAACACGGCTGGTCCTGAAAAAGGTCAAGCCGTGGCCCTCCGTTCAGCCTCCGACCTCTCGGTCTTCTACCGGTGCTCCATTGAAGGCTATGGGGACACACTAATGGCCGATTCACAACGTCAATTCTATCGAGATTGTAGAATTTTCGGCACAGTGGATTTCATTTGGAGAAATGCTGCGGTTGTTCTACAAAATTGTACAATTCTCGTAAGAAAGCCACTTCAAGGACAACCAAACATGATCACAGCACAAGGACGAGACGACCCATTTCAAAACACCGGAATAGCAATAATCAGTTCTCAAATCCGAGCAGCGCCAGATTTCAGGCCAGTTAATCACTCATTTGAAACCTACTTGGGTCGGCCATGGCACCAATATGCTCGAGTGGTTGTCATGAAAACTTATATTGAAGGCTTGGTAAATCCATTGGGATGGTCTCGATGGGACAATAGTGCCGTTGGTGAAGATACATGTTACTTTGGGGAATATATGAACTATGGGGCTGGTTCATCTATAAAAAGTAGGGTAAAATGGCCTGCCTTTCATATCATAACTAATCCAAATGAGGCAAACCAGTTTAGTGTTGCTAGCTTCCTTGCTGGTGGCACATGGTTGCCTAGCACTGGGGTCCCTTTTACTATTGGTGTTAATTAA 1320 0.4341 MQKCVFSDCLKLYDNTIFHLNRTLHGLHISSCSLSDAQTWLSTSLTNIETCRSVALQLGVGEFTTQNNVSDNVRKMISNVLAVNGKLMKQENYTEEEIKAHGFPSRFSLHDRRLLSLKPSSVKENLVVAQDGTGHFKTVQAAIDADSRRKVKTRFVIRVKKGIYEENIEVDTDNENLMIIGDGMRLTIITGNKSVKDGITPSMSATAGVDGAHFIARDITFRNTAGPEKGQAVALRSASDLSVFYRCSIEGYGDTLMADSQRQFYRDCRIFGTVDFIWRNAAVVLQNCTILVRKPLQGQPNMITAQGRDDPFQNTGIAIISSQIRAAPDFRPVNHSFETYLGRPWHQYARVVVMKTYIEGLVNPLGWSRWDNSAVGEDTCYFGEYMNYGAGSSIKSRVKWPAFHIITNPNEANQFSVASFLAGGTWLPSTGVPFTIGVN 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01561 439 FunFam Pectinesterase 119 438 - -
Accr13g01561 439 NCBIfam pectinesterase inhibitor domain 2 87 IPR006501 GO:0004857
Accr13g01561 439 Pfam Plant invertase/pectin methylesterase inhibitor 6 82 IPR006501 GO:0004857
Accr13g01561 439 CDD PMEI-like_3 1 89 - -
Accr13g01561 439 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 3 88 IPR035513 -
Accr13g01561 439 Gene3D - 119 438 IPR012334 -
Accr13g01561 439 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 89 IPR035513 -
Accr13g01561 439 PANTHER PECTINESTERASE 6 428 - -
Accr13g01561 439 SUPERFAMILY Pectin lyase-like 122 437 IPR011050 -
Accr13g01561 439 Pfam Pectinesterase 125 423 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01561 Accr-Chr13 26463641 26465052 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01561 2 435 Carbohydrate Esterase AT5G51500 56.948 4.90e-178 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01561 K01051 - gmx:100807908 557.37